Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is cotH [H]

Identifier: 126698605

GI number: 126698605

Start: 1191725

End: 1193632

Strand: Direct

Name: cotH [H]

Synonym: CD1021

Alternate gene names: 126698605

Gene position: 1191725-1193632 (Clockwise)

Preceding gene: 126698604

Following gene: 126698606

Centisome position: 27.78

GC content: 31.03

Gene sequence:

>1908_bases
ATGAAAGATAAAAAATTTACCCTTCTTATCTCGATTATGATTGTATTTTTATGTGCTGTAGTTGGAGTTTATAGTACATC
TAGCAACAAAAGTGTTGATTTATATAGTGATGTATATATTGAAAAATATTTTAACAGAGACAAGGTTATGGAAGTTAATA
TAGAGATAGATGAAAGTGACTTGAAGGATATGAATGAAAATGCTATAAAAGAAGAATTTAAGGTTGCAAAAGTAACTGTA
GATGGAGATACATATGGAAACGTAGGTATAAGAACTAAAGGAAATTCAAGTCTTATATCTGTAGCAAATAGTGATAGTGA
TAGATACAGCTATAAGATTAATTTTGATAAGTATAATACTAGTCAAAGTATGGAAGGGCTTACTCAATTAAATCTTAATA
ACTGTTACTCTGACCCATCTTATATGAGAGAGTTTTTAACATATAGTATTTGCGAGGAAATGGGATTAGCGACTCCAGAA
TTTGCATATGCTAAAGTCTCTATAAATGGCGAATATCATGGTTTGTATTTGGCAGTAGAAGGATTAAAAGAGTCTTATCT
TGAAAATAATTTTGGTAATGTAACTGGAGACTTATATAAGTCAGATGAAGGAAGCTCGTTGCAATATAAAGGAGATGACC
CAGAAAGTTACTCAAACTTAATCGTTGAAAGTGATAAAAAGACAGCTGATTGGTCTAAAATTACAAAACTATTAAAATCT
TTGGATACAGGTGAAGATATTGAAAAATATCTTGATGTAGATTCTGTCCTTAAAAATATAGCAATAAATACAGCTTTATT
AAACCTTGATAGCTATCAAGGGAGTTTTGCCCATAACTATTATTTATATGAGCAAGATGGAGTATTTTCTATGTTACCAT
GGGATTTTAATATGTCATTTGGTGGATTTAGTGGTTTTGGTGGAGGTAGTCAATCTATAGCAATTGATGAACCTACGACA
GGTAATTTAGAAGATAGACCTCTCATATCCTCGTTATTAAAAAATGAGACATACAAAACAAAATACCATAAATATCTGGA
AGAGATAGTAACAAAATACCTAGATTCAGACTATTTAGAGAATATGACAACAAAATTGCATGACATGATAGCATCATATG
TAAAAGAAGACCCAACAGCATTTTATACTTATGAAGAATTTGAAAAAAATATAACATCTTCAATTGAAGATTCTAGTGAT
AATAAGGGATTTGGTAATAAAGGGTTTGACAACAATAACTCTAATAACAGTGATTCTAATAATAATTCTAATAGTGAAAA
TAAGCGCTCTGGAAATCAAAGTGATGAAAAAGAAGTTAATGCTGAATTAACATCAAGCGTAGTCAAAGCTAATACAGATA
ATGAAACTAAAAATAAAACTACAAATGATAGTGAAAGTAAGAATAATACAGATAAAGATAAAAGTGGAAATGATAATAAT
CAAAAGCTAGAAGGTCCTATGGGTAAAGGAGGTAAGTCAATACCAGGGGTTTTGGAAGTTGCAGAAGATATGAGTAAAAC
TATAAAATCTCAATTAAGTGGAGAAACTTCTTCGACAAAGCAAAACTCTGGTGATGAAAGTTCAAGTGGAATTAAAGGTA
GTGAAAAGTTTGATGAGGATATGAGTGGTATGCCAGAACCACCTGAGGGAATGGATGGTAAAATGCCACCAGGAATGGGT
AATATGGATAAGGGAGATATGAATGGTAAAAATGGCAATATGAATATGGATAGAAATCAAGATAATCCAAGAGAAGCTGG
AGGTTTTGGCAATAGAGGAGGAGGCTCTGTGAGTAAAACAACAACATACTTCAAATTAATTTTAGGTGGAGCTTCAATGA
TAATAATGTCGATTATGTTAGTTGGTGTATCAAGGGTAAAGAGAAGAAGATTTATAAAGTCAAAATAA

Upstream 100 bases:

>100_bases
ACAAGTCTTATAAATGACTTGAGTCAAGTAGATGGAGTTACTAATGCAGTTCTTGTAAGTTATAATGGTGACTATGTAGC
ATAGAGAGGAGTAATCTTTT

Downstream 100 bases:

>100_bases
GATTAAAATTGAATATAAATAATTTTAATACTGTTAAGTCTAAATATTTACTTAGCAGTATTTTTTTAGAAAATAATGTA
TTTGGTTAATAATATAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MKDKKFTLLISIMIVFLCAVVGVYSTSSNKSVDLYSDVYIEKYFNRDKVMEVNIEIDESDLKDMNENAIKEEFKVAKVTV
DGDTYGNVGIRTKGNSSLISVANSDSDRYSYKINFDKYNTSQSMEGLTQLNLNNCYSDPSYMREFLTYSICEEMGLATPE
FAYAKVSINGEYHGLYLAVEGLKESYLENNFGNVTGDLYKSDEGSSLQYKGDDPESYSNLIVESDKKTADWSKITKLLKS
LDTGEDIEKYLDVDSVLKNIAINTALLNLDSYQGSFAHNYYLYEQDGVFSMLPWDFNMSFGGFSGFGGGSQSIAIDEPTT
GNLEDRPLISSLLKNETYKTKYHKYLEEIVTKYLDSDYLENMTTKLHDMIASYVKEDPTAFYTYEEFEKNITSSIEDSSD
NKGFGNKGFDNNNSNNSDSNNNSNSENKRSGNQSDEKEVNAELTSSVVKANTDNETKNKTTNDSESKNNTDKDKSGNDNN
QKLEGPMGKGGKSIPGVLEVAEDMSKTIKSQLSGETSSTKQNSGDESSSGIKGSEKFDEDMSGMPEPPEGMDGKMPPGMG
NMDKGDMNGKNGNMNMDRNQDNPREAGGFGNRGGGSVSKTTTYFKLILGGASMIIMSIMLVGVSRVKRRRFIKSK

Sequences:

>Translated_635_residues
MKDKKFTLLISIMIVFLCAVVGVYSTSSNKSVDLYSDVYIEKYFNRDKVMEVNIEIDESDLKDMNENAIKEEFKVAKVTV
DGDTYGNVGIRTKGNSSLISVANSDSDRYSYKINFDKYNTSQSMEGLTQLNLNNCYSDPSYMREFLTYSICEEMGLATPE
FAYAKVSINGEYHGLYLAVEGLKESYLENNFGNVTGDLYKSDEGSSLQYKGDDPESYSNLIVESDKKTADWSKITKLLKS
LDTGEDIEKYLDVDSVLKNIAINTALLNLDSYQGSFAHNYYLYEQDGVFSMLPWDFNMSFGGFSGFGGGSQSIAIDEPTT
GNLEDRPLISSLLKNETYKTKYHKYLEEIVTKYLDSDYLENMTTKLHDMIASYVKEDPTAFYTYEEFEKNITSSIEDSSD
NKGFGNKGFDNNNSNNSDSNNNSNSENKRSGNQSDEKEVNAELTSSVVKANTDNETKNKTTNDSESKNNTDKDKSGNDNN
QKLEGPMGKGGKSIPGVLEVAEDMSKTIKSQLSGETSSTKQNSGDESSSGIKGSEKFDEDMSGMPEPPEGMDGKMPPGMG
NMDKGDMNGKNGNMNMDRNQDNPREAGGFGNRGGGSVSKTTTYFKLILGGASMIIMSIMLVGVSRVKRRRFIKSK
>Mature_635_residues
MKDKKFTLLISIMIVFLCAVVGVYSTSSNKSVDLYSDVYIEKYFNRDKVMEVNIEIDESDLKDMNENAIKEEFKVAKVTV
DGDTYGNVGIRTKGNSSLISVANSDSDRYSYKINFDKYNTSQSMEGLTQLNLNNCYSDPSYMREFLTYSICEEMGLATPE
FAYAKVSINGEYHGLYLAVEGLKESYLENNFGNVTGDLYKSDEGSSLQYKGDDPESYSNLIVESDKKTADWSKITKLLKS
LDTGEDIEKYLDVDSVLKNIAINTALLNLDSYQGSFAHNYYLYEQDGVFSMLPWDFNMSFGGFSGFGGGSQSIAIDEPTT
GNLEDRPLISSLLKNETYKTKYHKYLEEIVTKYLDSDYLENMTTKLHDMIASYVKEDPTAFYTYEEFEKNITSSIEDSSD
NKGFGNKGFDNNNSNNSDSNNNSNSENKRSGNQSDEKEVNAELTSSVVKANTDNETKNKTTNDSESKNNTDKDKSGNDNN
QKLEGPMGKGGKSIPGVLEVAEDMSKTIKSQLSGETSSTKQNSGDESSSGIKGSEKFDEDMSGMPEPPEGMDGKMPPGMG
NMDKGDMNGKNGNMNMDRNQDNPREAGGFGNRGGGSVSKTTTYFKLILGGASMIIMSIMLVGVSRVKRRRFIKSK

Specific function: Involved in the assembly of several proteins in the inner and outer layer of the spore coat. Stabilizes CotC and CotU in the mother cell compartment of sporulating cells and promotes the assembly of both early and late forms of CotC-related polypeptides o

COG id: COG5337

COG function: function code M; Spore coat assembly protein

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014867 [H]

Pfam domain/function: PF08757 CotH [H]

EC number: NA

Molecular weight: Translated: 70450; Mature: 70450

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKKFTLLISIMIVFLCAVVGVYSTSSNKSVDLYSDVYIEKYFNRDKVMEVNIEIDESD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEEECHHH
LKDMNENAIKEEFKVAKVTVDGDTYGNVGIRTKGNSSLISVANSDSDRYSYKINFDKYNT
HHHHHHHHHHHCEEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEEECCCCC
SQSMEGLTQLNLNNCYSDPSYMREFLTYSICEEMGLATPEFAYAKVSINGEYHGLYLAVE
HHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEEEH
GLKESYLENNFGNVTGDLYKSDEGSSLQYKGDDPESYSNLIVESDKKTADWSKITKLLKS
HHHHHHHHCCCCCCCCCCEECCCCCEEEECCCCCHHHHCEEEECCCCCCCHHHHHHHHHH
LDTGEDIEKYLDVDSVLKNIAINTALLNLDSYQGSFAHNYYLYEQDGVFSMLPWDFNMSF
CCCCHHHHHHHCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEECCCEEEECCCCCCCCC
GGFSGFGGGSQSIAIDEPTTGNLEDRPLISSLLKNETYKTKYHKYLEEIVTKYLDSDYLE
CCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHH
NMTTKLHDMIASYVKEDPTAFYTYEEFEKNITSSIEDSSDNKGFGNKGFDNNNSNNSDSN
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
NNSNSENKRSGNQSDEKEVNAELTSSVVKANTDNETKNKTTNDSESKNNTDKDKSGNDNN
CCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QKLEGPMGKGGKSIPGVLEVAEDMSKTIKSQLSGETSSTKQNSGDESSSGIKGSEKFDED
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
MSGMPEPPEGMDGKMPPGMGNMDKGDMNGKNGNMNMDRNQDNPREAGGFGNRGGGSVSKT
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHH
TTYFKLILGGASMIIMSIMLVGVSRVKRRRFIKSK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDKKFTLLISIMIVFLCAVVGVYSTSSNKSVDLYSDVYIEKYFNRDKVMEVNIEIDESD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEEECHHH
LKDMNENAIKEEFKVAKVTVDGDTYGNVGIRTKGNSSLISVANSDSDRYSYKINFDKYNT
HHHHHHHHHHHCEEEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEEECCCCC
SQSMEGLTQLNLNNCYSDPSYMREFLTYSICEEMGLATPEFAYAKVSINGEYHGLYLAVE
HHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEEEH
GLKESYLENNFGNVTGDLYKSDEGSSLQYKGDDPESYSNLIVESDKKTADWSKITKLLKS
HHHHHHHHCCCCCCCCCCEECCCCCEEEECCCCCHHHHCEEEECCCCCCCHHHHHHHHHH
LDTGEDIEKYLDVDSVLKNIAINTALLNLDSYQGSFAHNYYLYEQDGVFSMLPWDFNMSF
CCCCHHHHHHHCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEECCCEEEECCCCCCCCC
GGFSGFGGGSQSIAIDEPTTGNLEDRPLISSLLKNETYKTKYHKYLEEIVTKYLDSDYLE
CCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHH
NMTTKLHDMIASYVKEDPTAFYTYEEFEKNITSSIEDSSDNKGFGNKGFDNNNSNNSDSN
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
NNSNSENKRSGNQSDEKEVNAELTSSVVKANTDNETKNKTTNDSESKNNTDKDKSGNDNN
CCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QKLEGPMGKGGKSIPGVLEVAEDMSKTIKSQLSGETSSTKQNSGDESSSGIKGSEKFDED
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
MSGMPEPPEGMDGKMPPGMGNMDKGDMNGKNGNMNMDRNQDNPREAGGFGNRGGGSVSKT
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHH
TTYFKLILGGASMIIMSIMLVGVSRVKRRRFIKSK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755863; 8991897; 9353933; 9384377; 7814326; 10198031 [H]