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The map label for this gene is yqbP [H]

Identifier: 126698544

GI number: 126698544

Start: 1129561

End: 1130250

Strand: Direct

Name: yqbP [H]

Synonym: CD0960

Alternate gene names: 126698544

Gene position: 1129561-1130250 (Clockwise)

Preceding gene: 126698543

Following gene: 126698545

Centisome position: 26.33

GC content: 31.3

Gene sequence:

>690_bases
ATGGCTTATGACTTTTATTTAGATGGAGTACAATTACCAATACCTCCGCCAAAGTTAGAGATTAAAGTTACAAATAAAAA
CAAGACAGTTGATTTGATAAATACTGGAGAAGTAAACATACTAAAAAAAGAAGGATTATCTGAAATAAGTTTTGAAGCAG
AATTTACACATAATAAGTTGCCATTCTATCGTGGAGCTTTTAGGGATGTTCAATTCTTTTTAAGTAAGCTAGAATTACTA
AAAACTGATTGTAAGCCATTTCAATTTATTGTCTCGAGGGAAATGGGTGGAAAAGTACTATTTAACACTAATATAAAAGT
ATCTCTTGAAGAGTATGCTATTTCAGAAGACGCAGATAATGGTTCAGATACAAAAGTTGCAATAAAGTTAAAGCAATATA
GAGATTATTCAACTAAAAAGTTAGTTCTTGCCCCTCCTAAAAATGAGACTGGTAGACCTAATGTAAAGATAGAGCCAAAA
CGAGTTGATTCAGTCAATGCCACAAACACTAAAACATATACAGTAAAAGCAGGGGATAGTCTTTGGTCAATTTGTCAGAA
ACAACTTGGTAATGGTTCATTATATAAGAAAGTATACGAATTAAATAAATCTATGATGGATAAGGCAAATAAGGGGAAGA
ATTTAAGTAAATACACCATTTATAAAGGGCAGGTGTTAAAACTTGGTTGA

Upstream 100 bases:

>100_bases
AGATACAGATGTCGACGGCATAGTAAATGTACTAACTGAAAAATTAAATGATGCTATGGTTGTTTCAGCCGAAGGAATAG
TTTAGAGAGGGGGAATATAA

Downstream 100 bases:

>100_bases
TGAATTAGTGTTAGCAAATGATAGAGATGTAAGATTAGTAATAGCTCATTGGGAAGATTTCTACGAACCTGCTGTCATTG
ATGGTATCACATGGGAGATA

Product: phage cell wall hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MAYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFYRGAFRDVQFFLSKLELL
KTDCKPFQFIVSREMGGKVLFNTNIKVSLEEYAISEDADNGSDTKVAIKLKQYRDYSTKKLVLAPPKNETGRPNVKIEPK
RVDSVNATNTKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKNLSKYTIYKGQVLKLG

Sequences:

>Translated_229_residues
MAYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFYRGAFRDVQFFLSKLELL
KTDCKPFQFIVSREMGGKVLFNTNIKVSLEEYAISEDADNGSDTKVAIKLKQYRDYSTKKLVLAPPKNETGRPNVKIEPK
RVDSVNATNTKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKNLSKYTIYKGQVLKLG
>Mature_228_residues
AYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFYRGAFRDVQFFLSKLELLK
TDCKPFQFIVSREMGGKVLFNTNIKVSLEEYAISEDADNGSDTKVAIKLKQYRDYSTKKLVLAPPKNETGRPNVKIEPKR
VDSVNATNTKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKNLSKYTIYKGQVLKLG

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 25951; Mature: 25820

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKL
CEEEEEECCEECCCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCEEEEEEECCCCC
PFYRGAFRDVQFFLSKLELLKTDCKPFQFIVSREMGGKVLFNTNIKVSLEEYAISEDADN
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCEEEEEHHEEECCCCCC
GSDTKVAIKLKQYRDYSTKKLVLAPPKNETGRPNVKIEPKRVDSVNATNTKTYTVKAGDS
CCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCH
LWSICQKQLGNGSLYKKVYELNKSMMDKANKGKNLSKYTIYKGQVLKLG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEC
>Mature Secondary Structure 
AYDFYLDGVQLPIPPPKLEIKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKL
EEEEEECCEECCCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCEEEEEEECCCCC
PFYRGAFRDVQFFLSKLELLKTDCKPFQFIVSREMGGKVLFNTNIKVSLEEYAISEDADN
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCEEEEEHHEEECCCCCC
GSDTKVAIKLKQYRDYSTKKLVLAPPKNETGRPNVKIEPKRVDSVNATNTKTYTVKAGDS
CCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCH
LWSICQKQLGNGSLYKKVYELNKSMMDKANKGKNLSKYTIYKGQVLKLG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]