Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is capM [H]
Identifier: 126696763
GI number: 126696763
Start: 1192420
End: 1193574
Strand: Reverse
Name: capM [H]
Synonym: P9301_14251
Alternate gene names: 126696763
Gene position: 1193574-1192420 (Counterclockwise)
Preceding gene: 126696764
Following gene: 126696761
Centisome position: 72.7
GC content: 25.97
Gene sequence:
>1155_bases ATGAAAAGAAAAATATGTCAATTATGTGGAGTTCAATTTACCTATGAGAAATTTTTAAAAAATCTATGTTCTGAATTGGT TAGTCATAATTATGAAGTGACTTCAATTTTTAAATGGGATGAAATTGAAATCATGCCTGAACAAAAGGGAGTCAAATTTA AAAATATTTTTTTTGAAAGAAAAATTTCTTTTTTTTCATTAATCAAGACTACTTATCAATTATTTAAGTATTTTCAAAAA GAAAAATTTGACATAATTGAGATTCATACTCCTTCTGCATCAATTCCTGGGAGGATTGCAGCAAAACTTGCAAGAATTAA AGTCGTTATTTATAAAGTTCATGGTTATTATTTTCATGAAAATATGAATTTTTTTAATAAAATGTTTCATATTTATATAG AGTTTTTCCTTGCAAAATTAACTGATTATATTTTTACTGTTTCTAAAGAAGATGAAATATTTTCTAAAGTATTTGGATTC AAGAAAACAGAGAAAATTTTTTACATTGGCAATGGAGTTAATAAGAATTTTTTTTATCCGGCCTCTAAATTAGATATTAC GAATGCTAAGGCTGATTTTGGAGTTAGTGATGATTTATTTATTATTGGAATAGTCTGTAGATTAGTAGATGAGAAGGGAT TATTAGAATTATTCAAAGCCTTTGATATTATTGCTCGAAATAACAAAAGTATAGGATTATTTGTTTGTGGGAATAAATTA AAAAGCGACTATAAAAAAGGTTTAGAAAAAGAACTTGAAATTTTAAAAGATAAATATGAAAATAGAATTTTTACACCTGG TCATGTAAAAGATGTTTATAGGGTATATAGAGTTATGGATTTATTCTGTCTCCCTTCATATAGAGAAGGGCTTCCATACA CCTTATTAGAGGCAATGATGTCGGGTATTCCAGTAGTAGCAAGTAATATTAGAGGAAATAGAGAAATTATTACTCATAAT AAAAATGGCCTTCTTTGCAAACCAAAAAGTGTTTATTCATTAAAAAATGCACTGGAGGAACTTATTGAAAATAAAAATAA AAGGGATGAATTTTCTAAAGAAGCTCTAAATAACGTTTTGGAAAATTACGATTCAGCCAAAGTTTTAGACAGAGAAATTA AACTTATTGATAAATTAAGCTTAAAGTTTTTTTGA
Upstream 100 bases:
>100_bases ACAGTCATTTAAAAGCAAAAGAAGACTTCGGATTTGAGCCTATTAGTTTTCAAGATGGTATTAAGTTACAAATTGATGAA ATGATCGTGCAAGGAGATTT
Downstream 100 bases:
>100_bases AAAGTTTAATTATTTTTAGTTTTTCATAATTTAATATCCTTTCGGATTTAATAGTTTCCATTTCCATCCATCAATACACA TTTCTTCAATATCTCTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKRKICQLCGVQFTYEKFLKNLCSELVSHNYEVTSIFKWDEIEIMPEQKGVKFKNIFFERKISFFSLIKTTYQLFKYFQK EKFDIIEIHTPSASIPGRIAAKLARIKVVIYKVHGYYFHENMNFFNKMFHIYIEFFLAKLTDYIFTVSKEDEIFSKVFGF KKTEKIFYIGNGVNKNFFYPASKLDITNAKADFGVSDDLFIIGIVCRLVDEKGLLELFKAFDIIARNNKSIGLFVCGNKL KSDYKKGLEKELEILKDKYENRIFTPGHVKDVYRVYRVMDLFCLPSYREGLPYTLLEAMMSGIPVVASNIRGNREIITHN KNGLLCKPKSVYSLKNALEELIENKNKRDEFSKEALNNVLENYDSAKVLDREIKLIDKLSLKFF
Sequences:
>Translated_384_residues MKRKICQLCGVQFTYEKFLKNLCSELVSHNYEVTSIFKWDEIEIMPEQKGVKFKNIFFERKISFFSLIKTTYQLFKYFQK EKFDIIEIHTPSASIPGRIAAKLARIKVVIYKVHGYYFHENMNFFNKMFHIYIEFFLAKLTDYIFTVSKEDEIFSKVFGF KKTEKIFYIGNGVNKNFFYPASKLDITNAKADFGVSDDLFIIGIVCRLVDEKGLLELFKAFDIIARNNKSIGLFVCGNKL KSDYKKGLEKELEILKDKYENRIFTPGHVKDVYRVYRVMDLFCLPSYREGLPYTLLEAMMSGIPVVASNIRGNREIITHN KNGLLCKPKSVYSLKNALEELIENKNKRDEFSKEALNNVLENYDSAKVLDREIKLIDKLSLKFF >Mature_384_residues MKRKICQLCGVQFTYEKFLKNLCSELVSHNYEVTSIFKWDEIEIMPEQKGVKFKNIFFERKISFFSLIKTTYQLFKYFQK EKFDIIEIHTPSASIPGRIAAKLARIKVVIYKVHGYYFHENMNFFNKMFHIYIEFFLAKLTDYIFTVSKEDEIFSKVFGF KKTEKIFYIGNGVNKNFFYPASKLDITNAKADFGVSDDLFIIGIVCRLVDEKGLLELFKAFDIIARNNKSIGLFVCGNKL KSDYKKGLEKELEILKDKYENRIFTPGHVKDVYRVYRVMDLFCLPSYREGLPYTLLEAMMSGIPVVASNIRGNREIITHN KNGLLCKPKSVYSLKNALEELIENKNKRDEFSKEALNNVLENYDSAKVLDREIKLIDKLSLKFF
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45009; Mature: 45009
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKICQLCGVQFTYEKFLKNLCSELVSHNYEVTSIFKWDEIEIMPEQKGVKFKNIFFER CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCHHHHHHHH KISFFSLIKTTYQLFKYFQKEKFDIIEIHTPSASIPGRIAAKLARIKVVIYKVHGYYFHE HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHEEEEEEEECEEEEC NMNFFNKMFHIYIEFFLAKLTDYIFTVSKEDEIFSKVFGFKKTEKIFYIGNGVNKNFFYP CHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCEECC ASKLDITNAKADFGVSDDLFIIGIVCRLVDEKGLLELFKAFDIIARNNKSIGLFVCGNKL CCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECHHH KSDYKKGLEKELEILKDKYENRIFTPGHVKDVYRVYRVMDLFCLPSYREGLPYTLLEAMM HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHH SGIPVVASNIRGNREIITHNKNGLLCKPKSVYSLKNALEELIENKNKRDEFSKEALNNVL CCCCEEECCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ENYDSAKVLDREIKLIDKLSLKFF HCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRKICQLCGVQFTYEKFLKNLCSELVSHNYEVTSIFKWDEIEIMPEQKGVKFKNIFFER CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCHHHHHHHH KISFFSLIKTTYQLFKYFQKEKFDIIEIHTPSASIPGRIAAKLARIKVVIYKVHGYYFHE HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHEEEEEEEECEEEEC NMNFFNKMFHIYIEFFLAKLTDYIFTVSKEDEIFSKVFGFKKTEKIFYIGNGVNKNFFYP CHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCEECC ASKLDITNAKADFGVSDDLFIIGIVCRLVDEKGLLELFKAFDIIARNNKSIGLFVCGNKL CCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECHHH KSDYKKGLEKELEILKDKYENRIFTPGHVKDVYRVYRVMDLFCLPSYREGLPYTLLEAMM HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHH SGIPVVASNIRGNREIITHNKNGLLCKPKSVYSLKNALEELIENKNKRDEFSKEALNNVL CCCCEEECCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ENYDSAKVLDREIKLIDKLSLKFF HCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]