Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696759
Identifier: 126696759
GI number: 126696759
Start: 1187412
End: 1188071
Strand: Reverse
Name: 126696759
Synonym: P9301_14211
Alternate gene names: NA
Gene position: 1188071-1187412 (Counterclockwise)
Preceding gene: 126696760
Following gene: 126696758
Centisome position: 72.36
GC content: 26.67
Gene sequence:
>660_bases ATGAAGGAGCATTCGGAGAGAGTAAGTAATAAAAATATAAAAGTTCTGCACGGTAAACCATTATTTTTTTACATAGCTGA TACTTTAAAAGATTTAGGTATATTTTCCAATTTGGTCATTAATACTGATAGTAATAAAATTTCAGAACTTGCTAAAGAAA GATATGGAGATTGGGTTAAAATACATAAACGTCCTGATTATCTAATAGGTGATAATGTTTCAATGAACAAAATAATCTCA TACGATGTTGGATTATGTGGAGAAGAAAAATTTTATTTACAAACACATAGTACTAATCCTCTTTTGAGATCTAGTTCTTT AATGAAAGCAATAAATTATTTTAAAGAATTATTCATAAAAAATGAAAAGGCGAGCTTATTTTCGGTTAATAAAATTCAAT CTAGACTTTATAACAAAGATTTAATACCCATAAATCACGATCCTGCTATATTACAAAGGACTCAAGATTTAGAAGATATC TATGAAGAAAATTCTTGCTTTTATATTTTTAGGGGAAAAACTTTTTTTAGATTAAATCATAGAATTAGCGACCAACCTTA CGTTTTTCCCCTTTCAAGGAATAGCAGGGAATATTTAGATATTGATGATTTATTTGATTGGAATTTGGTAGAAAATATTT TAACAATTACGAATAAATGA
Upstream 100 bases:
>100_bases CGTTTTAAATCATTATTTGATCTCAATTTTATTAATTTTAATTGGGATTTTGCATTGAATATTTTTGCATATGAAGTATG ACTTTGTTGCACTACTCCCA
Downstream 100 bases:
>100_bases AAAACTTTTATAAAAATCAAAAGTCATTTGATATTTTGAGTCCAAGAAAATTATTCTCTCAAATAAACAATTTAAGAGAA ATAAAATATTGGAGTAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: CMP-N-Acetylneuraminic Acid Synthetase; N-Acylneuraminate Cytidylyltransferase; HAD Family Hydrolase
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKEHSERVSNKNIKVLHGKPLFFYIADTLKDLGIFSNLVINTDSNKISELAKERYGDWVKIHKRPDYLIGDNVSMNKIIS YDVGLCGEEKFYLQTHSTNPLLRSSSLMKAINYFKELFIKNEKASLFSVNKIQSRLYNKDLIPINHDPAILQRTQDLEDI YEENSCFYIFRGKTFFRLNHRISDQPYVFPLSRNSREYLDIDDLFDWNLVENILTITNK
Sequences:
>Translated_219_residues MKEHSERVSNKNIKVLHGKPLFFYIADTLKDLGIFSNLVINTDSNKISELAKERYGDWVKIHKRPDYLIGDNVSMNKIIS YDVGLCGEEKFYLQTHSTNPLLRSSSLMKAINYFKELFIKNEKASLFSVNKIQSRLYNKDLIPINHDPAILQRTQDLEDI YEENSCFYIFRGKTFFRLNHRISDQPYVFPLSRNSREYLDIDDLFDWNLVENILTITNK >Mature_219_residues MKEHSERVSNKNIKVLHGKPLFFYIADTLKDLGIFSNLVINTDSNKISELAKERYGDWVKIHKRPDYLIGDNVSMNKIIS YDVGLCGEEKFYLQTHSTNPLLRSSSLMKAINYFKELFIKNEKASLFSVNKIQSRLYNKDLIPINHDPAILQRTQDLEDI YEENSCFYIFRGKTFFRLNHRISDQPYVFPLSRNSREYLDIDDLFDWNLVENILTITNK
Specific function: Unknown
COG id: COG1083
COG function: function code M; CMP-N-acetylneuraminic acid synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25799; Mature: 25799
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEHSERVSNKNIKVLHGKPLFFYIADTLKDLGIFSNLVINTDSNKISELAKERYGDWVK CCCHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCEEE IHKRPDYLIGDNVSMNKIISYDVGLCGEEKFYLQTHSTNPLLRSSSLMKAINYFKELFIK EECCCCEEECCCCCHHHEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC NEKASLFSVNKIQSRLYNKDLIPINHDPAILQRTQDLEDIYEENSCFYIFRGKTFFRLNH CCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEC RISDQPYVFPLSRNSREYLDIDDLFDWNLVENILTITNK CCCCCCEEEECCCCCCCEECHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MKEHSERVSNKNIKVLHGKPLFFYIADTLKDLGIFSNLVINTDSNKISELAKERYGDWVK CCCHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCEEE IHKRPDYLIGDNVSMNKIISYDVGLCGEEKFYLQTHSTNPLLRSSSLMKAINYFKELFIK EECCCCEEECCCCCHHHEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC NEKASLFSVNKIQSRLYNKDLIPINHDPAILQRTQDLEDIYEENSCFYIFRGKTFFRLNH CCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEC RISDQPYVFPLSRNSREYLDIDDLFDWNLVENILTITNK CCCCCCEEEECCCCCCCEECHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA