Click here to switch to the map view.

The map label for this gene is ybjT [C]

Identifier: 126696681

GI number: 126696681

Start: 1122289

End: 1123251

Strand: Reverse

Name: ybjT [C]

Synonym: P9301_13431

Alternate gene names: 126696681

Gene position: 1123251-1122289 (Counterclockwise)

Preceding gene: 126696682

Following gene: 126696680

Centisome position: 68.41

GC content: 32.4

Gene sequence:

>963_bases
ATGAAGATACTTTTAGTAGGAGCAACAGGTACACTTGGTAGACAAATAGCAAAGCAAGCTATAGAAGATGGACACGAAGT
AAGATGCTTTGTCAGAAACCCAAGAAAAGCTTCCTTTCTTCAAGAGTGGGGATGTGAACTAACAAAAGGTAATTTATTAA
ATTCTTCTGATATAGAATATGCATTGCAAGATATTGAAGTTGTTATTGATGCAGCTACCAGTAAACCAGATGATCCTAAA
AGTATTTATGAAACAGATTGGGATGGAAAACTTAATTTATTTAATGCTTGTGAATCTTTAAATGTAAAAAGAGTAATATT
CCTTTCAATTCTTTTAACAGAAAAATTTAGAAATGTTCCATTAATGGACATTAAATATTGTACTGAAAAACTTCTTGAGA
AATCTGATCTAGAATACACTATTTTCAAATGTGCAGCTTTTATGCAAGGAGTTATAGGTCAATTTGCTATTCCCATTTTA
GATAGTCAAGCAGTATGGATGAGTGGAACTCCTACTAAAATTGCATACATGAATACTCAAGACATGGCAAAAGTTATTGT
CGCAGCAGTTAATAATCCAAAAACTCATAGAACATCATTGCCATTGGTTGGTCCTAAAGCATGGGATTCAAACGAAGTCA
TATCCTTATGTGAAAAATTTAGCGAAAAGAAAGCTAAAATTTTTAGAGTTTCACCTTTTCTGATTAGTGTCACTCAGAAA
GTAGTTTCCTTTTTCCAAGATTCTTTAAGTGTTGCTGAAAGATTGGCTTTTGCCGAAGTAACTAGTAGTGGTGAATCATT
AGATGCTGACATGAGCAAAACTTACGAAATACTGGAACTTAAAAAAGAAGATATGACCTCACTAGAGAGTTATATAAAGG
AGTACTATCAACAAATACTTAAAAGATTAAGGGAGATGGAGGCAGATCTAAATATAGAGGAAAAAAAGAGATTACCATTT
TAA

Upstream 100 bases:

>100_bases
ATTGGTTGGTGGTGCTCTGTTGTTAAAGTTTCAGGGAGATTGATTCTCACGAATACATCACAATTTGAGTTATGGTCTAC
AGGTTAAGTAAATCTTAAAT

Downstream 100 bases:

>100_bases
TGTTGCAACTGTAGACTTATATAGTATATTTGTACTATATATATCTATTATTAATTATGTCTGTTTCTAAGTCTAAAAAT
CTTGAACGAAAACTAGATAA

Product: putative chaperon-like protein for quinone binding in photosystem II

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase Family Protein; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase-Like; 3 8-Divinyl Protochlorophyllide A 8-Vinyl Reductase; Nmra-Like Family Protein; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKILLVGATGTLGRQIAKQAIEDGHEVRCFVRNPRKASFLQEWGCELTKGNLLNSSDIEYALQDIEVVIDAATSKPDDPK
SIYETDWDGKLNLFNACESLNVKRVIFLSILLTEKFRNVPLMDIKYCTEKLLEKSDLEYTIFKCAAFMQGVIGQFAIPIL
DSQAVWMSGTPTKIAYMNTQDMAKVIVAAVNNPKTHRTSLPLVGPKAWDSNEVISLCEKFSEKKAKIFRVSPFLISVTQK
VVSFFQDSLSVAERLAFAEVTSSGESLDADMSKTYEILELKKEDMTSLESYIKEYYQQILKRLREMEADLNIEEKKRLPF

Sequences:

>Translated_320_residues
MKILLVGATGTLGRQIAKQAIEDGHEVRCFVRNPRKASFLQEWGCELTKGNLLNSSDIEYALQDIEVVIDAATSKPDDPK
SIYETDWDGKLNLFNACESLNVKRVIFLSILLTEKFRNVPLMDIKYCTEKLLEKSDLEYTIFKCAAFMQGVIGQFAIPIL
DSQAVWMSGTPTKIAYMNTQDMAKVIVAAVNNPKTHRTSLPLVGPKAWDSNEVISLCEKFSEKKAKIFRVSPFLISVTQK
VVSFFQDSLSVAERLAFAEVTSSGESLDADMSKTYEILELKKEDMTSLESYIKEYYQQILKRLREMEADLNIEEKKRLPF
>Mature_320_residues
MKILLVGATGTLGRQIAKQAIEDGHEVRCFVRNPRKASFLQEWGCELTKGNLLNSSDIEYALQDIEVVIDAATSKPDDPK
SIYETDWDGKLNLFNACESLNVKRVIFLSILLTEKFRNVPLMDIKYCTEKLLEKSDLEYTIFKCAAFMQGVIGQFAIPIL
DSQAVWMSGTPTKIAYMNTQDMAKVIVAAVNNPKTHRTSLPLVGPKAWDSNEVISLCEKFSEKKAKIFRVSPFLISVTQK
VVSFFQDSLSVAERLAFAEVTSSGESLDADMSKTYEILELKKEDMTSLESYIKEYYQQILKRLREMEADLNIEEKKRLPF

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36271; Mature: 36271

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLVGATGTLGRQIAKQAIEDGHEVRCFVRNPRKASFLQEWGCELTKGNLLNSSDIEY
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHH
ALQDIEVVIDAATSKPDDPKSIYETDWDGKLNLFNACESLNVKRVIFLSILLTEKFRNVP
HHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
LMDIKYCTEKLLEKSDLEYTIFKCAAFMQGVIGQFAIPILDSQAVWMSGTPTKIAYMNTQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCEEEEECHH
DMAKVIVAAVNNPKTHRTSLPLVGPKAWDSNEVISLCEKFSEKKAKIFRVSPFLISVTQK
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHH
VVSFFQDSLSVAERLAFAEVTSSGESLDADMSKTYEILELKKEDMTSLESYIKEYYQQIL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLREMEADLNIEEKKRLPF
HHHHHHHCCCCCHHHCCCCC
>Mature Secondary Structure
MKILLVGATGTLGRQIAKQAIEDGHEVRCFVRNPRKASFLQEWGCELTKGNLLNSSDIEY
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHH
ALQDIEVVIDAATSKPDDPKSIYETDWDGKLNLFNACESLNVKRVIFLSILLTEKFRNVP
HHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
LMDIKYCTEKLLEKSDLEYTIFKCAAFMQGVIGQFAIPILDSQAVWMSGTPTKIAYMNTQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCCEEEEECHH
DMAKVIVAAVNNPKTHRTSLPLVGPKAWDSNEVISLCEKFSEKKAKIFRVSPFLISVTQK
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHH
VVSFFQDSLSVAERLAFAEVTSSGESLDADMSKTYEILELKKEDMTSLESYIKEYYQQIL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLREMEADLNIEEKKRLPF
HHHHHHHCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA