Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126696642

Identifier: 126696642

GI number: 126696642

Start: 1094812

End: 1095234

Strand: Reverse

Name: 126696642

Synonym: P9301_13041

Alternate gene names: NA

Gene position: 1095234-1094812 (Counterclockwise)

Preceding gene: 126696643

Following gene: 126696639

Centisome position: 66.71

GC content: 34.99

Gene sequence:

>423_bases
ATGAAATTAAAAAAATTTGTTCCATTTTGCTTCCTTTTTATTGGGACTTTAGCTTTACCACAACCTTCTCTTGCTGAAGA
AAAGATTGAAGTTATTCCGATTATTCAAAGTTCAAAAGGACTAAGTGGTAAAAATTTTAATTATCTCGAGGGTAAGCCTG
AATTAAGACTCTTAAAAGTAAAAATTCCAGTTGGCTTGAAAACTCCAATTCATACTCATCCTTCCCCAATGTTGATTCAT
GTTACTAGAGGAAGATTAAAGCATGTGAGGGGTGAAGAAATTAATTTTTTTAGAGCTGGTGATGCATTTATAGAGAGTAA
TAATGGTGGCCCCCACTATGTTAAAAACGTTGGGAAGAAGCCGGCCATACTTCATGTGGGAGTTGTATCAGTAGTTGGAA
TGCCTACGGCCATAAATAAATAA

Upstream 100 bases:

>100_bases
GATTTAAGAGAGGAAATTAAGCAATTAGAAAAGTTATACAAAAAATAAATTAGTTTATAATTTTTGAAACTACCTATTAT
TAGTGAAAATCAAATATCTA

Downstream 100 bases:

>100_bases
GATTTTCCTCAAAGTTGTTCAATCTACATGAGGATTGAAATTTTATGAAGAACAGCTGTAGTGAGATACGCCTCCATAGT
TAAAATACTGGCTTGGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKLKKFVPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFRAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINK

Sequences:

>Translated_140_residues
MKLKKFVPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFRAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINK
>Mature_140_residues
MKLKKFVPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFRAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15428; Mature: 15428

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKFVPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCEEEEEE
KIPVGLKTPIHTHPSPMLIHVTRGRLKHVRGEEINFFRAGDAFIESNNGGPHYVKNVGKK
EECCCCCCCCCCCCCCEEEEEECCHHCCCCCCCEEEEECCCEEEECCCCCCHHHHHCCCC
PAILHVGVVSVVGMPTAINK
CCEEEEEHHHHHCCCCCCCC
>Mature Secondary Structure
MKLKKFVPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCEEEEEE
KIPVGLKTPIHTHPSPMLIHVTRGRLKHVRGEEINFFRAGDAFIESNNGGPHYVKNVGKK
EECCCCCCCCCCCCCCEEEEEECCHHCCCCCCCEEEEECCCEEEECCCCCCHHHHHCCCC
PAILHVGVVSVVGMPTAINK
CCEEEEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA