Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696587
Identifier: 126696587
GI number: 126696587
Start: 1058668
End: 1058973
Strand: Reverse
Name: 126696587
Synonym: P9301_12491
Alternate gene names: NA
Gene position: 1058973-1058668 (Counterclockwise)
Preceding gene: 126696592
Following gene: 126696586
Centisome position: 64.5
GC content: 37.25
Gene sequence:
>306_bases ATGTCTTGTTCCATAACCTCAGTTTTTACTTTTAAAATTGAAAGCACTTTCGATGAATGGGCCGCGATATTTGACAGTGC GGAAGCTGAAAAAAGACATTCTGAATTTCTCATTAAGCCACTTTTTAGAGGAGTAAGTAAGGAAGATCCTCAAAAAGTTA TTGTCATTCATCAAGCTCCAGAAGGAAATGTTCAAAAGTTTGTGGAAGCTAATGGTGACTGGATGGCAACGCATAGAGTT GACCTTTCAACAATGGAAGAATCATCTTGGACTTCTTCAACAACAACGGAAAGTTGTTGTGATTAA
Upstream 100 bases:
>100_bases CTTAAATTTGAAAAAACATCTGTTTTAATTCCATTTAAAGATAATTAACTAAACCTTAATTAAACAGACTTATTTTAATT AAACAAACAATATCTTTATT
Downstream 100 bases:
>100_bases CAAATGAAAAGACTACTATTCCCACTACTAGCTCTCTCAACTATTTTTCTTGCGAGTTGTACTAGTAACTCAAACAAAAT AGGTACTCAAAAGGTTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSCSITSVFTFKIESTFDEWAAIFDSAEAEKRHSEFLIKPLFRGVSKEDPQKVIVIHQAPEGNVQKFVEANGDWMATHRV DLSTMEESSWTSSTTTESCCD
Sequences:
>Translated_101_residues MSCSITSVFTFKIESTFDEWAAIFDSAEAEKRHSEFLIKPLFRGVSKEDPQKVIVIHQAPEGNVQKFVEANGDWMATHRV DLSTMEESSWTSSTTTESCCD >Mature_100_residues SCSITSVFTFKIESTFDEWAAIFDSAEAEKRHSEFLIKPLFRGVSKEDPQKVIVIHQAPEGNVQKFVEANGDWMATHRVD LSTMEESSWTSSTTTESCCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11397; Mature: 11266
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCSITSVFTFKIESTFDEWAAIFDSAEAEKRHSEFLIKPLFRGVSKEDPQKVIVIHQAP CCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC EGNVQKFVEANGDWMATHRVDLSTMEESSWTSSTTTESCCD CCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SCSITSVFTFKIESTFDEWAAIFDSAEAEKRHSEFLIKPLFRGVSKEDPQKVIVIHQAP CCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC EGNVQKFVEANGDWMATHRVDLSTMEESSWTSSTTTESCCD CCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA