Click here to switch to the map view.

The map label for this gene is hupE

Identifier: 126696569

GI number: 126696569

Start: 1045962

End: 1046666

Strand: Reverse

Name: hupE

Synonym: P9301_12311

Alternate gene names: NA

Gene position: 1046666-1045962 (Counterclockwise)

Preceding gene: 126696570

Following gene: 126696566

Centisome position: 63.75

GC content: 32.77

Gene sequence:

>705_bases
GTGTTTGTCCTTGCGAATGTACAGATTGTGAAGAATGTTCACCATGCAAAGATCATTAATTTAAATAGAAAAATGAATTC
TAAAAATTTTTTTCATAAGAACTTAAAAGTCTCTTTAATAATCTTCCCTGTATATTTGTTTTTTATTAGTATCTATAATC
CAGTATTTGCTCATCATCCATTTGGTATGGGTGAGAGTTCCACATTAACTTCCTGGCAGGGATTTATCAGTGGTATTGGT
CATCCCTTATTAGGTCCAGACCATCTCCTTTTTATTTTGGCAATAAGTCTTATTGGATTGAGATTCCCAAAAAAATGGAT
ATTACCTTTATTAGGTTTTGGTTTAATTGGAAGTGCTATTGCGCAAATTTTGTCATTGCCAGAATTTATGATTCCCTACG
CAGAAGCATTAGTATCTTTAAGCTTAGTTTTAGAAAGTTTGATAATTTTGGGCTATTTACCTAGCTCATTACTTTTACCC
ATGATCTCTTTGCATGGTTACTTGATAGGAGGTGCAATTGTTGGTGCTGAGCAAAGTCCTCTATTAAGTTACTTTTTAGG
AATATTTATAGGGCAAGGATCTTTGCTCTTAATAGTCCTATACTTATCAGAGCATATTGGAAAAATTTTAAAGAATAAAA
ATTTGGTTTCGGGAATTTTAATCGGTATTGGAGCAGCCTTTTCATGGGTCGCACTTATTGATTAA

Upstream 100 bases:

>100_bases
TAGAAATAAATTTTCCAAATTATGGTTATTACTTTTACAAAACATTTAGTAACAGATACTTTGATTTTAAACGAGAAAGA
AGTTTGTCCAGGTTGTGGTT

Downstream 100 bases:

>100_bases
TAAGTGTTCTAAAATTTTTGGGGAACAACCTAATTGATGGAATTGTCAATAAAAGGCACTAGATAAGTAAGTGACGACCG
CAACAACTGTATCCTAGCTA

Product: putative hydrogenase accessory protein

Products: NA

Alternate protein names: Hydrogenase Accessory Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFVLANVQIVKNVHHAKIINLNRKMNSKNFFHKNLKVSLIIFPVYLFFISIYNPVFAHHPFGMGESSTLTSWQGFISGIG
HPLLGPDHLLFILAISLIGLRFPKKWILPLLGFGLIGSAIAQILSLPEFMIPYAEALVSLSLVLESLIILGYLPSSLLLP
MISLHGYLIGGAIVGAEQSPLLSYFLGIFIGQGSLLLIVLYLSEHIGKILKNKNLVSGILIGIGAAFSWVALID

Sequences:

>Translated_234_residues
MFVLANVQIVKNVHHAKIINLNRKMNSKNFFHKNLKVSLIIFPVYLFFISIYNPVFAHHPFGMGESSTLTSWQGFISGIG
HPLLGPDHLLFILAISLIGLRFPKKWILPLLGFGLIGSAIAQILSLPEFMIPYAEALVSLSLVLESLIILGYLPSSLLLP
MISLHGYLIGGAIVGAEQSPLLSYFLGIFIGQGSLLLIVLYLSEHIGKILKNKNLVSGILIGIGAAFSWVALID
>Mature_234_residues
MFVLANVQIVKNVHHAKIINLNRKMNSKNFFHKNLKVSLIIFPVYLFFISIYNPVFAHHPFGMGESSTLTSWQGFISGIG
HPLLGPDHLLFILAISLIGLRFPKKWILPLLGFGLIGSAIAQILSLPEFMIPYAEALVSLSLVLESLIILGYLPSSLLLP
MISLHGYLIGGAIVGAEQSPLLSYFLGIFIGQGSLLLIVLYLSEHIGKILKNKNLVSGILIGIGAAFSWVALID

Specific function: Unknown

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25598; Mature: 25598

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVLANVQIVKNVHHAKIINLNRKMNSKNFFHKNLKVSLIIFPVYLFFISIYNPVFAHHP
CEEEECHHHHHHHHHHHEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
FGMGESSTLTSWQGFISGIGHPLLGPDHLLFILAISLIGLRFPKKWILPLLGFGLIGSAI
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AQILSLPEFMIPYAEALVSLSLVLESLIILGYLPSSLLLPMISLHGYLIGGAIVGAEQSP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEECCCCCH
LLSYFLGIFIGQGSLLLIVLYLSEHIGKILKNKNLVSGILIGIGAAFSWVALID
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFVLANVQIVKNVHHAKIINLNRKMNSKNFFHKNLKVSLIIFPVYLFFISIYNPVFAHHP
CEEEECHHHHHHHHHHHEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
FGMGESSTLTSWQGFISGIGHPLLGPDHLLFILAISLIGLRFPKKWILPLLGFGLIGSAI
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AQILSLPEFMIPYAEALVSLSLVLESLIILGYLPSSLLLPMISLHGYLIGGAIVGAEQSP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEECCCCCH
LLSYFLGIFIGQGSLLLIVLYLSEHIGKILKNKNLVSGILIGIGAAFSWVALID
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA