Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696551
Identifier: 126696551
GI number: 126696551
Start: 1032427
End: 1032744
Strand: Reverse
Name: 126696551
Synonym: P9301_12131
Alternate gene names: NA
Gene position: 1032744-1032427 (Counterclockwise)
Preceding gene: 126696552
Following gene: 126696550
Centisome position: 62.9
GC content: 31.45
Gene sequence:
>318_bases ATGACAACATACTTTTTCGTTGCAGCAAGTGAAAAGTTTTTAACAGTTGAAGAACCACTTGATGAAATTTTGAAAGAGAG GATGAGGAACTATAAAGAAAATAATAAAGAAATAGATTTTTGGCTCTTAAAAAATCCATCATTTTTACAAACCACCCAAT TTGCTGATCTAAAAGCAAAAATTCCATCTACCCCAGCAGTTGTTTTGTCGACCGATAAAAAATTTATAACTTTCTTAAAG CTTCGTTTAGAGTTTGTTGCTGTGGGGGAATTCGAATTTCCTAATGCAGAAATAATTGATCCATTTAAAGTTGAGTAA
Upstream 100 bases:
>100_bases TGAACATAGGTCATAGTATTGTTGCTAGGGCTTTAGCGATAGGATTAGAAAAGTCTGTACGTGAGATGAAGTCCCTTATC ACATCAAATTAAATTTTAAA
Downstream 100 bases:
>100_bases TATAACCATCTAGTAAATTGCTCAATCTTTATAAGTCAAATAAAATTGAAGTAATTAGTGAGCTGTTAGCAGAGGAATTA AAAATATGTCCTCCGGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTTYFFVAASEKFLTVEEPLDEILKERMRNYKENNKEIDFWLLKNPSFLQTTQFADLKAKIPSTPAVVLSTDKKFITFLK LRLEFVAVGEFEFPNAEIIDPFKVE
Sequences:
>Translated_105_residues MTTYFFVAASEKFLTVEEPLDEILKERMRNYKENNKEIDFWLLKNPSFLQTTQFADLKAKIPSTPAVVLSTDKKFITFLK LRLEFVAVGEFEFPNAEIIDPFKVE >Mature_104_residues TTYFFVAASEKFLTVEEPLDEILKERMRNYKENNKEIDFWLLKNPSFLQTTQFADLKAKIPSTPAVVLSTDKKFITFLKL RLEFVAVGEFEFPNAEIIDPFKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf54 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019616 [H]
Pfam domain/function: PF10674 DUF2488 [H]
EC number: NA
Molecular weight: Translated: 12301; Mature: 12170
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYFFVAASEKFLTVEEPLDEILKERMRNYKENNKEIDFWLLKNPSFLQTTQFADLKAK CCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEEC IPSTPAVVLSTDKKFITFLKLRLEFVAVGEFEFPNAEIIDPFKVE CCCCCEEEEECCHHHHHHHHHEEEEEEECCCCCCCCCCCCCEECC >Mature Secondary Structure TTYFFVAASEKFLTVEEPLDEILKERMRNYKENNKEIDFWLLKNPSFLQTTQFADLKAK CEEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEEC IPSTPAVVLSTDKKFITFLKLRLEFVAVGEFEFPNAEIIDPFKVE CCCCCEEEEECCHHHHHHHHHEEEEEEECCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]