| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is srmB [H]
Identifier: 126696546
GI number: 126696546
Start: 1021486
End: 1023267
Strand: Reverse
Name: srmB [H]
Synonym: P9301_12081
Alternate gene names: 126696546
Gene position: 1023267-1021486 (Counterclockwise)
Preceding gene: 126696547
Following gene: 126696545
Centisome position: 62.32
GC content: 29.8
Gene sequence:
>1782_bases ATGGCTTTTAAAAAAGATAGTAACTCTCTTGGTAGTGAGCAGGAAAACTCTCAGAATGACGATTCTTCTCTACTAGAGTT CAAGAACTTAGATAACAAAAAAGAAATTGAATCTCAACTATTGGAAGTATCTAAGGGAGAAGATAATGACAATGGATTTC TCGAATTTGGGTTTAATCAATCGATCTTAAACTCGTTAATAAATAAAGGATATAAAAATCCAACTCCCATCCAAAAAGCT GCAATTCCCGAACTAATGTTAGGCAGGGATTTATTAGGCCAAGCACAAACAGGAACAGGAAAGACTGCAGCTTTCGCATT ACCATTAATAGAAAAACTTACAGATAATAAAGAATTAAATGCCAAGGTTTTAGTTATGACTCCTACAAGAGAATTAGCAA CTCAAGTGGCAGAATCCTTTAAAAGTTATAGTTCTGAATCTAGTAATTTTAAGACGGTTGCAATATATGGAGGTACCGAC TATCGAAATCAAATTTCTGCATTAAAAAGAAAAGTTGACGTAGTAGTTGGGACCCCAGGCCGAATAATGGATCATATAAG GCAGGGTACTTTTAAAATTAAAGATATAAATTGTCTTGTTTTAGATGAGGCAGATGAAATGTTAAATATGGGTTTTCTTG AAGATATTGAATGGATAATAGATCAACTTCCGGAAAATAAGCAGATGGTATTGTTTTCAGCAACAATGCCTAATGAGATA AGAAATATAGCAAAAAAATATCTAAATGATCCCGCCGAAATATTAATCAAAAGTGTCAAAAAAGAAACTCAATTAATTTC TCAAAAATTTCTATATGTTCAAAGACATCATAAGTTAGATGCTTTAAAAAGAATACTAGAACTTAATAACGAGGGAGTAA TTATTTTTGTTAGGACAAAACTACTTACTACTTCAATCGCTGAAGCTTTAGAGAATTCAGGTCATACTGTGGCAGTACTT AATGGAGATATACCTCAAAATCAAAGAGAAAATACTGTAGATAGATTGAAAAAAGGATTTATTAATATTCTTGTTGCAAC TGATGTCGCAGCTAGGGGATTAGATGTTGAGAGGATAAAACTTGTTGTTAATTACGATTTTCCTTTTGACAAGGAAACAT ATACTCATAGAATTGGAAGAACTGGAAGGGCAGGCAGATCAGGAGAAGCAATTTTATTCGTTAATCTAAGAGAAAAACAT TTTCTAAGAAACTTAGAAAATTCAACAAGAACCAAGATTGAAGAAATTAATATACCAAGTAATAAAATAATAAATGAAAA AAGGATGGAGAAACTTATAGATAGTTTTAATGAGAGTTCTTTAGCTAAAGATGAAAATGAAGAAAATAAAGCTTTGATTA TTGATGTACTAGATAATTTAAAAGAAAAATACTCTATGGATGACTCAAATATTGCAATGGCGGCTATTAATTTAGTAATA GGTAATAAATCATTTTTTGTTAATGACGATGATTCTTGGATTAATAAACAAAATAATACTGATCGAAATAGATCAAATAG AAATAATAATAACCGTATGAGAAATTCAAGTAGAAGAAATAATTATCAAAATGATTCTTTTGAAACCTACAAATTTAACT TTGGTAAATTTGATGGAGTTAGAGTTGCAAATATTATATCCTCAATCTGTAATTCAACTAATATAAATGGTAGATCCATA GGTAAGATACAGATTTTTAATGATTACAGTTTGGTAGATTTACCAAGAGATCTGCATAGAGAAACTAAAAATAAATTAAA AAAAATTAAAGTAAGAAACTAG
Upstream 100 bases:
>100_bases GATGTTAGATTAATATTTCGGCTCTGTAAGGCTAATCAACAATTTATGTCAATTTAGATATTTGTTGAATGCCTAATCAG AAGATTATTAGGCATTTAAA
Downstream 100 bases:
>100_bases TGATACAGAATGAAAGCTGGCAAATATAATTTCTTTTTTGTTGTGAATCTGATAATACTATTCAACTCCTTTAATAGTTA TTATTTAGCTCAAACAAAAC
Product: putative ATP-dependent RNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MAFKKDSNSLGSEQENSQNDDSSLLEFKNLDNKKEIESQLLEVSKGEDNDNGFLEFGFNQSILNSLINKGYKNPTPIQKA AIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLTDNKELNAKVLVMTPTRELATQVAESFKSYSSESSNFKTVAIYGGTD YRNQISALKRKVDVVVGTPGRIMDHIRQGTFKIKDINCLVLDEADEMLNMGFLEDIEWIIDQLPENKQMVLFSATMPNEI RNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLDALKRILELNNEGVIIFVRTKLLTTSIAEALENSGHTVAVL NGDIPQNQRENTVDRLKKGFINILVATDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNLREKH FLRNLENSTRTKIEEINIPSNKIINEKRMEKLIDSFNESSLAKDENEENKALIIDVLDNLKEKYSMDDSNIAMAAINLVI GNKSFFVNDDDSWINKQNNTDRNRSNRNNNNRMRNSSRRNNYQNDSFETYKFNFGKFDGVRVANIISSICNSTNINGRSI GKIQIFNDYSLVDLPRDLHRETKNKLKKIKVRN
Sequences:
>Translated_593_residues MAFKKDSNSLGSEQENSQNDDSSLLEFKNLDNKKEIESQLLEVSKGEDNDNGFLEFGFNQSILNSLINKGYKNPTPIQKA AIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLTDNKELNAKVLVMTPTRELATQVAESFKSYSSESSNFKTVAIYGGTD YRNQISALKRKVDVVVGTPGRIMDHIRQGTFKIKDINCLVLDEADEMLNMGFLEDIEWIIDQLPENKQMVLFSATMPNEI RNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLDALKRILELNNEGVIIFVRTKLLTTSIAEALENSGHTVAVL NGDIPQNQRENTVDRLKKGFINILVATDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNLREKH FLRNLENSTRTKIEEINIPSNKIINEKRMEKLIDSFNESSLAKDENEENKALIIDVLDNLKEKYSMDDSNIAMAAINLVI GNKSFFVNDDDSWINKQNNTDRNRSNRNNNNRMRNSSRRNNYQNDSFETYKFNFGKFDGVRVANIISSICNSTNINGRSI GKIQIFNDYSLVDLPRDLHRETKNKLKKIKVRN >Mature_592_residues AFKKDSNSLGSEQENSQNDDSSLLEFKNLDNKKEIESQLLEVSKGEDNDNGFLEFGFNQSILNSLINKGYKNPTPIQKAA IPELMLGRDLLGQAQTGTGKTAAFALPLIEKLTDNKELNAKVLVMTPTRELATQVAESFKSYSSESSNFKTVAIYGGTDY RNQISALKRKVDVVVGTPGRIMDHIRQGTFKIKDINCLVLDEADEMLNMGFLEDIEWIIDQLPENKQMVLFSATMPNEIR NIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLDALKRILELNNEGVIIFVRTKLLTTSIAEALENSGHTVAVLN GDIPQNQRENTVDRLKKGFINILVATDVAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNLREKHF LRNLENSTRTKIEEINIPSNKIINEKRMEKLIDSFNESSLAKDENEENKALIIDVLDNLKEKYSMDDSNIAMAAINLVIG NKSFFVNDDDSWINKQNNTDRNRSNRNNNNRMRNSSRRNNYQNDSFETYKFNFGKFDGVRVANIISSICNSTNINGRSIG KIQIFNDYSLVDLPRDLHRETKNKLKKIKVRN
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=380, Percent_Identity=37.8947368421053, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI13129006, Length=416, Percent_Identity=36.2980769230769, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI45446747, Length=375, Percent_Identity=36, Blast_Score=255, Evalue=8e-68, Organism=Homo sapiens, GI45446743, Length=375, Percent_Identity=36, Blast_Score=255, Evalue=8e-68, Organism=Homo sapiens, GI50659095, Length=418, Percent_Identity=36.6028708133971, Blast_Score=252, Evalue=7e-67, Organism=Homo sapiens, GI224593278, Length=417, Percent_Identity=34.5323741007194, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=38.0681818181818, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI31542656, Length=387, Percent_Identity=35.6589147286822, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI20149629, Length=462, Percent_Identity=32.4675324675325, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI164664518, Length=376, Percent_Identity=35.6382978723404, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI41327771, Length=369, Percent_Identity=36.5853658536585, Blast_Score=238, Evalue=2e-62, Organism=Homo sapiens, GI148613856, Length=395, Percent_Identity=35.9493670886076, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI38201710, Length=395, Percent_Identity=35.9493670886076, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI301171475, Length=358, Percent_Identity=37.1508379888268, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171467, Length=358, Percent_Identity=37.1508379888268, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI87196351, Length=358, Percent_Identity=37.1508379888268, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI169881239, Length=358, Percent_Identity=37.4301675977654, Blast_Score=229, Evalue=7e-60, Organism=Homo sapiens, GI13514809, Length=358, Percent_Identity=37.4301675977654, Blast_Score=229, Evalue=7e-60, Organism=Homo sapiens, GI262118318, Length=380, Percent_Identity=36.5789473684211, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI216548263, Length=380, Percent_Identity=36.5789473684211, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI13518015, Length=380, Percent_Identity=36.5789473684211, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI262231852, Length=380, Percent_Identity=36.5789473684211, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI188035877, Length=373, Percent_Identity=35.3887399463807, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI222352149, Length=344, Percent_Identity=36.9186046511628, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=35.5113636363636, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=34.7457627118644, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=34.7457627118644, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI21071032, Length=355, Percent_Identity=36.056338028169, Blast_Score=222, Evalue=8e-58, Organism=Homo sapiens, GI21040371, Length=356, Percent_Identity=34.5505617977528, Blast_Score=220, Evalue=3e-57, Organism=Homo sapiens, GI51094101, Length=365, Percent_Identity=33.6986301369863, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI164419743, Length=365, Percent_Identity=33.6986301369863, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=38.0053908355795, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI4503529, Length=377, Percent_Identity=37.1352785145889, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI55749865, Length=345, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI256223453, Length=395, Percent_Identity=31.3924050632911, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI38327634, Length=432, Percent_Identity=31.4814814814815, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI13514831, Length=446, Percent_Identity=29.8206278026906, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=33.0749354005168, Blast_Score=189, Evalue=8e-48, Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=9e-48, Organism=Homo sapiens, GI38569505, Length=362, Percent_Identity=31.767955801105, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI38569503, Length=362, Percent_Identity=31.767955801105, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=34.0540540540541, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI41327776, Length=445, Percent_Identity=28.5393258426966, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI62241024, Length=353, Percent_Identity=33.9943342776204, Blast_Score=179, Evalue=9e-45, Organism=Homo sapiens, GI41327779, Length=384, Percent_Identity=29.1666666666667, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI9506931, Length=405, Percent_Identity=30.6172839506173, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=32.7077747989276, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI17505907, Length=475, Percent_Identity=27.1578947368421, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI154759257, Length=456, Percent_Identity=27.1929824561404, Blast_Score=147, Evalue=4e-35, Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=28.3132530120482, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI256773275, Length=382, Percent_Identity=29.3193717277487, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI20336298, Length=258, Percent_Identity=30.6201550387597, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI9966805, Length=311, Percent_Identity=27.6527331189711, Blast_Score=110, Evalue=4e-24, Organism=Escherichia coli, GI87082221, Length=549, Percent_Identity=42.0765027322404, Blast_Score=432, Evalue=1e-122, Organism=Escherichia coli, GI1787016, Length=375, Percent_Identity=40.5333333333333, Blast_Score=289, Evalue=4e-79, Organism=Escherichia coli, GI1787605, Length=409, Percent_Identity=36.1858190709046, Blast_Score=260, Evalue=2e-70, Organism=Escherichia coli, GI1790214, Length=358, Percent_Identity=38.268156424581, Blast_Score=248, Evalue=6e-67, Organism=Escherichia coli, GI1788930, Length=377, Percent_Identity=37.4005305039788, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI48994977, Length=452, Percent_Identity=21.6814159292035, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71995724, Length=409, Percent_Identity=35.6968215158924, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI17555296, Length=399, Percent_Identity=34.8370927318296, Blast_Score=254, Evalue=9e-68, Organism=Caenorhabditis elegans, GI17507121, Length=374, Percent_Identity=37.1657754010695, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=36.3387978142077, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI32565321, Length=375, Percent_Identity=37.0666666666667, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=39.4886363636364, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17510309, Length=376, Percent_Identity=38.2978723404255, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17510307, Length=376, Percent_Identity=38.2978723404255, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI71995514, Length=376, Percent_Identity=38.2978723404255, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI17552114, Length=397, Percent_Identity=34.2569269521411, Blast_Score=241, Evalue=8e-64, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=35.6382978723404, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI17537549, Length=356, Percent_Identity=36.5168539325843, Blast_Score=232, Evalue=5e-61, Organism=Caenorhabditis elegans, GI115533224, Length=373, Percent_Identity=37.5335120643432, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI17510559, Length=501, Percent_Identity=29.940119760479, Blast_Score=231, Evalue=9e-61, Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=37.7358490566038, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI71999646, Length=358, Percent_Identity=31.2849162011173, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71999644, Length=358, Percent_Identity=31.2849162011173, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=32.4324324324324, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI115532548, Length=394, Percent_Identity=32.994923857868, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=33.4190231362468, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71982858, Length=392, Percent_Identity=30.3571428571429, Blast_Score=206, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17507881, Length=415, Percent_Identity=31.566265060241, Blast_Score=205, Evalue=6e-53, Organism=Caenorhabditis elegans, GI17507945, Length=356, Percent_Identity=35.6741573033708, Blast_Score=201, Evalue=9e-52, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=31.6216216216216, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=32.7536231884058, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17509811, Length=379, Percent_Identity=31.9261213720317, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17536099, Length=405, Percent_Identity=33.8271604938272, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17536101, Length=405, Percent_Identity=33.8271604938272, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17536103, Length=405, Percent_Identity=33.8271604938272, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=30.9192200557103, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17505370, Length=390, Percent_Identity=30.7692307692308, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI193208216, Length=373, Percent_Identity=32.171581769437, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71990816, Length=356, Percent_Identity=31.1797752808989, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17508543, Length=378, Percent_Identity=28.3068783068783, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17507641, Length=395, Percent_Identity=28.3544303797468, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI32564046, Length=386, Percent_Identity=28.4974093264249, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI25148203, Length=420, Percent_Identity=25.4761904761905, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17556951, Length=384, Percent_Identity=25.5208333333333, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71982862, Length=264, Percent_Identity=29.1666666666667, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.4924471299094, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17557982, Length=404, Percent_Identity=26.980198019802, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI71997889, Length=366, Percent_Identity=23.4972677595628, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71987152, Length=101, Percent_Identity=43.5643564356436, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI25148205, Length=351, Percent_Identity=24.2165242165242, Blast_Score=97, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=37.7840909090909, Blast_Score=250, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6324217, Length=350, Percent_Identity=39.1428571428571, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=350, Percent_Identity=40, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6325138, Length=406, Percent_Identity=34.9753694581281, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6321856, Length=376, Percent_Identity=35.9042553191489, Blast_Score=238, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=355, Percent_Identity=36.056338028169, Blast_Score=236, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=35.8904109589041, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=370, Percent_Identity=34.0540540540541, Blast_Score=222, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6322912, Length=373, Percent_Identity=36.7292225201072, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6322323, Length=373, Percent_Identity=36.7292225201072, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6321963, Length=408, Percent_Identity=34.5588235294118, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6320173, Length=411, Percent_Identity=30.1703163017032, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=455, Percent_Identity=32.0879120879121, Blast_Score=199, Evalue=9e-52, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=32.5842696629214, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=398, Percent_Identity=31.1557788944724, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=365, Percent_Identity=33.4246575342466, Blast_Score=193, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6319714, Length=350, Percent_Identity=32.5714285714286, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=369, Percent_Identity=32.2493224932249, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=430, Percent_Identity=30.6976744186047, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=391, Percent_Identity=32.2250639386189, Blast_Score=173, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=387, Percent_Identity=31.7829457364341, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=27.9904306220096, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=482, Percent_Identity=26.9709543568465, Blast_Score=141, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6319618, Length=282, Percent_Identity=32.2695035460993, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=366, Percent_Identity=26.5027322404372, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=213, Percent_Identity=27.2300469483568, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24645031, Length=405, Percent_Identity=35.5555555555556, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24584399, Length=341, Percent_Identity=40.4692082111437, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24662330, Length=370, Percent_Identity=37.2972972972973, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24642151, Length=358, Percent_Identity=35.4748603351955, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=38.031914893617, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24585582, Length=371, Percent_Identity=35.3099730458221, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI17985987, Length=361, Percent_Identity=38.2271468144044, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=38.2436260623229, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI21355075, Length=349, Percent_Identity=37.2492836676218, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI21356161, Length=418, Percent_Identity=33.7320574162679, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24583279, Length=409, Percent_Identity=32.2738386308068, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583281, Length=409, Percent_Identity=32.2738386308068, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI17977678, Length=355, Percent_Identity=36.6197183098592, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI18857967, Length=356, Percent_Identity=35.9550561797753, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI24644483, Length=376, Percent_Identity=34.8404255319149, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644479, Length=376, Percent_Identity=34.8404255319149, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI281361218, Length=376, Percent_Identity=34.8404255319149, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24644481, Length=376, Percent_Identity=34.8404255319149, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24644487, Length=376, Percent_Identity=34.8404255319149, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI45551833, Length=376, Percent_Identity=34.8404255319149, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24644485, Length=376, Percent_Identity=34.8404255319149, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24582080, Length=387, Percent_Identity=36.1757105943152, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI24582078, Length=387, Percent_Identity=36.1757105943152, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136248, Length=387, Percent_Identity=36.1757105943152, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI24582075, Length=387, Percent_Identity=36.1757105943152, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI28575014, Length=362, Percent_Identity=33.9779005524862, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=34.2776203966006, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=34.2776203966006, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=34.2776203966006, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI17136814, Length=376, Percent_Identity=35.3723404255319, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=36.3344051446945, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI28571808, Length=410, Percent_Identity=30.9756097560976, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI28571809, Length=410, Percent_Identity=30.9756097560976, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI17647335, Length=390, Percent_Identity=30.7692307692308, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=32.2222222222222, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24643725, Length=386, Percent_Identity=31.6062176165803, Blast_Score=176, Evalue=5e-44, Organism=Drosophila melanogaster, GI21355559, Length=375, Percent_Identity=33.3333333333333, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI19920478, Length=395, Percent_Identity=30.379746835443, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24642822, Length=414, Percent_Identity=28.5024154589372, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI20130173, Length=508, Percent_Identity=25.9842519685039, Blast_Score=159, Evalue=6e-39, Organism=Drosophila melanogaster, GI24668515, Length=362, Percent_Identity=27.0718232044199, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI17136666, Length=424, Percent_Identity=25.9433962264151, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24640164, Length=362, Percent_Identity=25.6906077348066, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI28571338, Length=198, Percent_Identity=31.3131313131313, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI18859659, Length=198, Percent_Identity=31.3131313131313, Blast_Score=115, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 67488; Mature: 67357
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKKDSNSLGSEQENSQNDDSSLLEFKNLDNKKEIESQLLEVSKGEDNDNGFLEFGFNQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCH SILNSLINKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLTDNKELN HHHHHHHHCCCCCCCCCHHHHCHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC AKVLVMTPTRELATQVAESFKSYSSESSNFKTVAIYGGTDYRNQISALKRKVDVVVGTPG EEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHEEEEECCCH RIMDHIRQGTFKIKDINCLVLDEADEMLNMGFLEDIEWIIDQLPENKQMVLFSATMPNEI HHHHHHHCCCEEEEEEEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCHHH RNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLDALKRILELNNEGVIIFVRTK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHH LLTTSIAEALENSGHTVAVLNGDIPQNQRENTVDRLKKGFINILVATDVAARGLDVERIK HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEEHHHHHCCCCHHHEE LVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNLREKHFLRNLENSTRTKIEEINIPS EEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHCCHHHCCCEEECCCC NKIINEKRMEKLIDSFNESSLAKDENEENKALIIDVLDNLKEKYSMDDSNIAMAAINLVI HHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEEEEEE GNKSFFVNDDDSWINKQNNTDRNRSNRNNNNRMRNSSRRNNYQNDSFETYKFNFGKFDGV CCCEEEECCCHHHHCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCEEEEEECCCCCCC RVANIISSICNSTNINGRSIGKIQIFNDYSLVDLPRDLHRETKNKLKKIKVRN HHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AFKKDSNSLGSEQENSQNDDSSLLEFKNLDNKKEIESQLLEVSKGEDNDNGFLEFGFNQ CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCH SILNSLINKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLTDNKELN HHHHHHHHCCCCCCCCCHHHHCHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC AKVLVMTPTRELATQVAESFKSYSSESSNFKTVAIYGGTDYRNQISALKRKVDVVVGTPG EEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHEEEEECCCH RIMDHIRQGTFKIKDINCLVLDEADEMLNMGFLEDIEWIIDQLPENKQMVLFSATMPNEI HHHHHHHCCCEEEEEEEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCHHH RNIAKKYLNDPAEILIKSVKKETQLISQKFLYVQRHHKLDALKRILELNNEGVIIFVRTK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHH LLTTSIAEALENSGHTVAVLNGDIPQNQRENTVDRLKKGFINILVATDVAARGLDVERIK HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEEHHHHHCCCCHHHEE LVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVNLREKHFLRNLENSTRTKIEEINIPS EEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHCCHHHCCCEEECCCC NKIINEKRMEKLIDSFNESSLAKDENEENKALIIDVLDNLKEKYSMDDSNIAMAAINLVI HHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEEEEEE GNKSFFVNDDDSWINKQNNTDRNRSNRNNNNRMRNSSRRNNYQNDSFETYKFNFGKFDGV CCCEEEECCCHHHHCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCEEEEEECCCCCCC RVANIISSICNSTNINGRSIGKIQIFNDYSLVDLPRDLHRETKNKLKKIKVRN HHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]