Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696527
Identifier: 126696527
GI number: 126696527
Start: 1001795
End: 1002289
Strand: Reverse
Name: 126696527
Synonym: P9301_11891
Alternate gene names: NA
Gene position: 1002289-1001795 (Counterclockwise)
Preceding gene: 126696528
Following gene: 126696525
Centisome position: 61.05
GC content: 23.43
Gene sequence:
>495_bases ATGAATATTTTGAAGAATCTCTTTTTATCTAAAAAAAAATCTGAAAAAAATAAAGACTCTAGTCCTGGATTGGTTGATAA ATATATAGAAATTGCAGAGTTAGTCAAAGAAGCAAGAATCCAACAAAACCTTACAGTAAAAGAATTGTCATGCATTTCAA AAATTCCTGAAAGCGTAATAAATTCTATTGAAAATAACAATAAAAATATTATGCCGAAGTACCCTTTTATGAGATCTATA TTAATTAAATTAGAGGAATGCTTAGGATTAAAAAAAAATACCTTATTAAAATTAACAGTTAGAGAAAGAAAAATTTTAAA GAAAGGGGAAAACGATTTTCTGTTAAGGAAATTTGATCTTATAAATACATGGCAGGGAAGTCTTTTGTATTTTTTTATAT TAGTTTTAACTATATTTTTACTAAAGAGGTACTTTGTTTTTAATGTAAATGTAATAGAGATTCAAAATATTGAAAATCAA ATCATTAATAAATAA
Upstream 100 bases:
>100_bases AATGAATTTACTTATGATTTTAATTAGATTAGAATCAATAGAGAATGTGGTTTTTAAAAAAAATTGAGTAGAAAAAGGAT TAATTAGCTTGTGAATATTA
Downstream 100 bases:
>100_bases TTTTTAATAAACTCTACTTTCGAGTTCTCCCAAAATTACTTCCTAGCTCACTAAAGATTTTTATATTATCTTCTATTTCT TCTAAAGATCGATTTAACTT
Product: helix-turn-helix
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MNILKNLFLSKKKSEKNKDSSPGLVDKYIEIAELVKEARIQQNLTVKELSCISKIPESVINSIENNNKNIMPKYPFMRSI LIKLEECLGLKKNTLLKLTVRERKILKKGENDFLLRKFDLINTWQGSLLYFFILVLTIFLLKRYFVFNVNVIEIQNIENQ IINK
Sequences:
>Translated_164_residues MNILKNLFLSKKKSEKNKDSSPGLVDKYIEIAELVKEARIQQNLTVKELSCISKIPESVINSIENNNKNIMPKYPFMRSI LIKLEECLGLKKNTLLKLTVRERKILKKGENDFLLRKFDLINTWQGSLLYFFILVLTIFLLKRYFVFNVNVIEIQNIENQ IINK >Mature_164_residues MNILKNLFLSKKKSEKNKDSSPGLVDKYIEIAELVKEARIQQNLTVKELSCISKIPESVINSIENNNKNIMPKYPFMRSI LIKLEECLGLKKNTLLKLTVRERKILKKGENDFLLRKFDLINTWQGSLLYFFILVLTIFLLKRYFVFNVNVIEIQNIENQ IINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19264; Mature: 19264
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILKNLFLSKKKSEKNKDSSPGLVDKYIEIAELVKEARIQQNLTVKELSCISKIPESVI CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NSIENNNKNIMPKYPFMRSILIKLEECLGLKKNTLLKLTVRERKILKKGENDFLLRKFDL HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHH INTWQGSLLYFFILVLTIFLLKRYFVFNVNVIEIQNIENQIINK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCC >Mature Secondary Structure MNILKNLFLSKKKSEKNKDSSPGLVDKYIEIAELVKEARIQQNLTVKELSCISKIPESVI CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NSIENNNKNIMPKYPFMRSILIKLEECLGLKKNTLLKLTVRERKILKKGENDFLLRKFDL HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHH INTWQGSLLYFFILVLTIFLLKRYFVFNVNVIEIQNIENQIINK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA