Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is ynhA [C]
Identifier: 126696496
GI number: 126696496
Start: 971666
End: 972085
Strand: Reverse
Name: ynhA [C]
Synonym: P9301_11581
Alternate gene names: 126696496
Gene position: 972085-971666 (Counterclockwise)
Preceding gene: 126696497
Following gene: 126696495
Centisome position: 59.21
GC content: 28.33
Gene sequence:
>420_bases ATGGTAAATCAGGAAAAATACAATAATTTATCAAAATTAGTAGAAAAGTTGAAGAAATCAGAAGATCCAAAAAGAAAATA TGAATACATTTTGTGGTTAGGGAAAAAATTGAAAGAACCAGGTAATGAAATCCTTATTGAAGAAAATAAAGTTAAGGGAT GCGTTTCAGAAGTTTTTGTTAAGGCTAATATTAAAGGCGGTAAATTATTTTGGGAAGGATATTCTGATGCTTTGATAACA AAGGGTTTATTGGCCTTTCTAATAAGTGGATTAAATGAATTAACACCAAATGAAGTTGTTGAAATAGATAAGAAATTTAT AGAAGATACTGGTTTGAAAACAAGCTTAACCCCTTCACGATCAAATGGTTTTTTAAACATTTTATTGAAAATGCAGTCTC AAGCAAATGAATTTTTGTAG
Upstream 100 bases:
>100_bases GCCAGAGCTGATTGGGATATTCCTTTATCAGGTTTTATCACAGAAAAAGAAATATTTGTATAATAGAAGATTAATAAAGT GATTAATTTATAGTTTTAAA
Downstream 100 bases:
>100_bases GCCTAATAATATAAAATTAAACTCAAAGTTAAAAAGAAATAAAAAATGAGAAAATGCAAAATTGGGATTGTAGGTTTTGG AACTGTAGGTTCAGGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MVNQEKYNNLSKLVEKLKKSEDPKRKYEYILWLGKKLKEPGNEILIEENKVKGCVSEVFVKANIKGGKLFWEGYSDALIT KGLLAFLISGLNELTPNEVVEIDKKFIEDTGLKTSLTPSRSNGFLNILLKMQSQANEFL
Sequences:
>Translated_139_residues MVNQEKYNNLSKLVEKLKKSEDPKRKYEYILWLGKKLKEPGNEILIEENKVKGCVSEVFVKANIKGGKLFWEGYSDALIT KGLLAFLISGLNELTPNEVVEIDKKFIEDTGLKTSLTPSRSNGFLNILLKMQSQANEFL >Mature_139_residues MVNQEKYNNLSKLVEKLKKSEDPKRKYEYILWLGKKLKEPGNEILIEENKVKGCVSEVFVKANIKGGKLFWEGYSDALIT KGLLAFLISGLNELTPNEVVEIDKKFIEDTGLKTSLTPSRSNGFLNILLKMQSQANEFL
Specific function: Unknown
COG id: COG2166
COG function: function code R; SufE protein probably involved in Fe-S center assembly
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sufE family [H]
Homologues:
Organism=Escherichia coli, GI1787969, Length=116, Percent_Identity=34.4827586206897, Blast_Score=68, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003808 [H]
Pfam domain/function: PF02657 SufE [H]
EC number: NA
Molecular weight: Translated: 15812; Mature: 15812
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNQEKYNNLSKLVEKLKKSEDPKRKYEYILWLGKKLKEPGNEILIEENKVKGCVSEVFV CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH KANIKGGKLFWEGYSDALITKGLLAFLISGLNELTPNEVVEIDKKFIEDTGLKTSLTPSR HCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC SNGFLNILLKMQSQANEFL CCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVNQEKYNNLSKLVEKLKKSEDPKRKYEYILWLGKKLKEPGNEILIEENKVKGCVSEVFV CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH KANIKGGKLFWEGYSDALITKGLLAFLISGLNELTPNEVVEIDKKFIEDTGLKTSLTPSR HCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC SNGFLNILLKMQSQANEFL CCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]