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The map label for this gene is ddpA [H]

Identifier: 126696493

GI number: 126696493

Start: 968408

End: 969979

Strand: Reverse

Name: ddpA [H]

Synonym: P9301_11551

Alternate gene names: 126696493

Gene position: 969979-968408 (Counterclockwise)

Preceding gene: 126696494

Following gene: 126696492

Centisome position: 59.08

GC content: 29.71

Gene sequence:

>1572_bases
ATGAAAAAAAAAATTGTTTTATCAATATTTATAATTTTAATTTCTTTTTTACAGAATTCTTGCGGCTCAAAAAGAATATC
TAAAAAAATTATAGTAGCAAGTTCTGGAAAAATTGAATCTTTAGATCCAGCTAGAGCAAATACTCTTAAAGCAATTCAAT
TAATCAGTTCTCTTGGAGACACATTATATGAATTAAATTCTAAGGGAGAATTAATACCTGAATTGGCCTCGGGGATGCCA
GTTATTTCAAAGGATAGACTTCAAATAACTATCAATTTAAGAAAGAATGTTTTTTTTCACGATGGAACTGCTTTTAACTC
AAATGCTATGAAGTTTACCTTTGATAGATTCAAAAGAATTGGAACTATGAACTACATTTTAGGAAATAAGATTAAATCAA
TAGAAACGCCAAGTGAATATTCAGTCATAATAAATTTGAATAAACCATCAAGTTCTTTAAATGGTTTACTCACATCAGTA
AATTTAACTCCAATATCCCCTACATTTTACAAACAATATTCTGATAAGTTTCTAAATGAAAAATTTGTTGGTACTGGCAA
GTATGTGCTGACCAGTTTTTCTAATGAAGTTCAATCAATTGATCCATATTTGAATTATTGGGGTGAAAAGCCCTTCAATA
ACGGCGTTAATTTTGTGGGCTATTCAAATTCATCCTCTCTTTTTGGGGCTTTAAAAAGTAAACAAATTGACGTGCTTTTA
TCAAATTCAATTGATGATAGTCAGAGAAAAAGTTTAAATGATTTAAGCAAAAATAAACAGTTTAATGAAGGTAATAGCCC
TTTCACTGAATTAAGTTTTATAAGCCTCAAAACTAGTTCTTATCCCTTAAGTAATCTTAATTTAAGATTGGCTTTGGCAA
AAAGTCTTAATAGAAAATTGATTAGTGAGAAAGTAAGTTATGGATTAAGGAAGCCATCTAGATCAATTATTCCTCCGATA
TTAAAAAAAGATAATCAAGAACTGTGGCCTAAATATGATTATTTAGAAGCAAGAAGGTTATTGCAAAAAGAAAATTATTG
CAATGGAAATATTCTAAAAATACCCCTTACTTATAGATCTAATGTACCAGCTGACAAGCTTATTGCTCTGACATGGCAAG
AAGAAATTAAAAATTCTTTGAAAGATTGTATTGATATTGAACTCAATGGGGTTGAATCTACAACAGTTTATAAGAATCTA
AGTTTAGGAATTTATACGGCAGTCCTTCTCGATTGGACTGGGGCTTATTCAGATCCAGAGGCTTATCTTACCCCTCTTTT
AAGTTGTAATGAAATAGTTGACGGCATATGTAAAAAAGGAGAATCAGTTTATAGCGGGAGTTTTTGGGGATCTAATAAAG
TGGAAAGTTTATTTCTTGAGAGTGAAAAAATAAGTGGAATTAAAAGATTAGAAAAACTTGTTGAAATTGAAAAAATAGCA
GCAAGTTCAATACCTTATATTCCTATTTGGATCTCCTCTCAAAAAGCATGGTCACAAAATAAAATATCAAAACCTATTTT
TAATGGCGCAGGAATAATTTCATTGAGTAATCTTGAGTTAATTAATGAGTAG

Upstream 100 bases:

>100_bases
CTTGTAATTCTAAAAAAACATTTGCTTTAGAAATTAGTCAAATAACCTTACAAATTTTCTGCTCAAATAATTCTTCAGAA
TAATTAGGAACTATTGAAAT

Downstream 100 bases:

>100_bases
AAATTTAAATAAACTACTAAATTATTCCTTATTAAAAATTTCATTAATACCGATAATGCTATGGATAATTTCTTCATTAG
TTTTTATTTTATTAAGAGTT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKKKIVLSIFIILISFLQNSCGSKRISKKIIVASSGKIESLDPARANTLKAIQLISSLGDTLYELNSKGELIPELASGMP
VISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRIGTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSV
NLTPISPTFYKQYSDKFLNEKFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPFNNGVNFVGYSNSSSLFGALKSKQIDVLL
SNSIDDSQRKSLNDLSKNKQFNEGNSPFTELSFISLKTSSYPLSNLNLRLALAKSLNRKLISEKVSYGLRKPSRSIIPPI
LKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRSNVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNL
SLGIYTAVLLDWTGAYSDPEAYLTPLLSCNEIVDGICKKGESVYSGSFWGSNKVESLFLESEKISGIKRLEKLVEIEKIA
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSNLELINE

Sequences:

>Translated_523_residues
MKKKIVLSIFIILISFLQNSCGSKRISKKIIVASSGKIESLDPARANTLKAIQLISSLGDTLYELNSKGELIPELASGMP
VISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRIGTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSV
NLTPISPTFYKQYSDKFLNEKFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPFNNGVNFVGYSNSSSLFGALKSKQIDVLL
SNSIDDSQRKSLNDLSKNKQFNEGNSPFTELSFISLKTSSYPLSNLNLRLALAKSLNRKLISEKVSYGLRKPSRSIIPPI
LKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRSNVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNL
SLGIYTAVLLDWTGAYSDPEAYLTPLLSCNEIVDGICKKGESVYSGSFWGSNKVESLFLESEKISGIKRLEKLVEIEKIA
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSNLELINE
>Mature_523_residues
MKKKIVLSIFIILISFLQNSCGSKRISKKIIVASSGKIESLDPARANTLKAIQLISSLGDTLYELNSKGELIPELASGMP
VISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRIGTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSV
NLTPISPTFYKQYSDKFLNEKFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPFNNGVNFVGYSNSSSLFGALKSKQIDVLL
SNSIDDSQRKSLNDLSKNKQFNEGNSPFTELSFISLKTSSYPLSNLNLRLALAKSLNRKLISEKVSYGLRKPSRSIIPPI
LKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRSNVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNL
SLGIYTAVLLDWTGAYSDPEAYLTPLLSCNEIVDGICKKGESVYSGSFWGSNKVESLFLESEKISGIKRLEKLVEIEKIA
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSNLELINE

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=484, Percent_Identity=22.3140495867769, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI87081878, Length=472, Percent_Identity=22.8813559322034, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1789887, Length=395, Percent_Identity=24.5569620253165, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789966, Length=465, Percent_Identity=22.3655913978495, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1787762, Length=349, Percent_Identity=24.6418338108883, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787551, Length=490, Percent_Identity=21.0204081632653, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58582; Mature: 58582

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIVLSIFIILISFLQNSCGSKRISKKIIVASSGKIESLDPARANTLKAIQLISSLGD
CCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
TLYELNSKGELIPELASGMPVISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRI
HHHHHCCCCCCHHHHHCCCCEEECCCEEEEEEEECCEEEECCCEECCCCEEEEHHHHHHH
GTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSVNLTPISPTFYKQYSDKFLNE
CCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
KFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPFNNGVNFVGYSNSSSLFGALKSKQIDVLL
CCCCCCCHHEEHHHHHHHHCCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEE
SNSIDDSQRKSLNDLSKNKQFNEGNSPFTELSFISLKTSSYPLSNLNLRLALAKSLNRKL
ECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHH
ISEKVSYGLRKPSRSIIPPILKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRS
HHHHHHHHCCCCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
NVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNLSLGIYTAVLLDWTGAYSDPE
CCCHHHEEEEEEHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCH
AYLTPLLSCNEIVDGICKKGESVYSGSFWGSNKVESLFLESEKISGIKRLEKLVEIEKIA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSNLELINE
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCC
>Mature Secondary Structure
MKKKIVLSIFIILISFLQNSCGSKRISKKIIVASSGKIESLDPARANTLKAIQLISSLGD
CCCHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
TLYELNSKGELIPELASGMPVISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRI
HHHHHCCCCCCHHHHHCCCCEEECCCEEEEEEEECCEEEECCCEECCCCEEEEHHHHHHH
GTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSVNLTPISPTFYKQYSDKFLNE
CCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
KFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPFNNGVNFVGYSNSSSLFGALKSKQIDVLL
CCCCCCCHHEEHHHHHHHHCCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHCCCEEEEE
SNSIDDSQRKSLNDLSKNKQFNEGNSPFTELSFISLKTSSYPLSNLNLRLALAKSLNRKL
ECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHH
ISEKVSYGLRKPSRSIIPPILKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRS
HHHHHHHHCCCCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
NVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNLSLGIYTAVLLDWTGAYSDPE
CCCHHHEEEEEEHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCH
AYLTPLLSCNEIVDGICKKGESVYSGSFWGSNKVESLFLESEKISGIKRLEKLVEIEKIA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSNLELINE
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA