Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126696464
Identifier: 126696464
GI number: 126696464
Start: 948687
End: 949094
Strand: Reverse
Name: 126696464
Synonym: P9301_11261
Alternate gene names: NA
Gene position: 949094-948687 (Counterclockwise)
Preceding gene: 126696469
Following gene: 126696463
Centisome position: 57.81
GC content: 30.64
Gene sequence:
>408_bases ATGATTTGTTTAATTCTTCTGTTAATGAAAATACTTTTTTTAGCAATTTTAATTTGTTCAAGCTTTTTATTCCCTTCTTC ATCATTTGCCTCACATGTAGAACTAAAACCTTGTGTAGAGATTGCTCATTGTGTACGAGAAGAATGGAAGGTTAACAATA TTGAGAAACCTTTTGAAGAGATTAAAACATTTATCGAAAATACTCCAAGAACTGAGATTGTAGAAATTGATGGCGATTAT CTTCATGCTGAGGCTACCAGTAAATGGATGAAGTATGTAGACGACTTAGAAGTATCCTTTTTACCTGAATCAAACATCTT ATCAATAAGATCAGAATCAAGAGTTGGAGAAAGTGATTTGGGAGTAAATCAAAAAAGAGTTGATTTACTAAAATCGAAAA TGTTTTAA
Upstream 100 bases:
>100_bases TTGGAAATACATATTAAATCCTGAATATAAAAAAATATATGCTTTCTTAAAAAAATAATTAGATACTTCATTACAAATTA GTAATTTATTTAGTTAGATT
Downstream 100 bases:
>100_bases ATAAAAGTAAAAAAAACTAATTTGTTTTTATTGTTTTTTGTATAACTTTTCCATTTTTAAAAAAAATTAGCAGATAAAAA AGTAATAATTGTCATCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MICLILLLMKILFLAILICSSFLFPSSSFASHVELKPCVEIAHCVREEWKVNNIEKPFEEIKTFIENTPRTEIVEIDGDY LHAEATSKWMKYVDDLEVSFLPESNILSIRSESRVGESDLGVNQKRVDLLKSKMF
Sequences:
>Translated_135_residues MICLILLLMKILFLAILICSSFLFPSSSFASHVELKPCVEIAHCVREEWKVNNIEKPFEEIKTFIENTPRTEIVEIDGDY LHAEATSKWMKYVDDLEVSFLPESNILSIRSESRVGESDLGVNQKRVDLLKSKMF >Mature_135_residues MICLILLLMKILFLAILICSSFLFPSSSFASHVELKPCVEIAHCVREEWKVNNIEKPFEEIKTFIENTPRTEIVEIDGDY LHAEATSKWMKYVDDLEVSFLPESNILSIRSESRVGESDLGVNQKRVDLLKSKMF
Specific function: Unknown
COG id: COG4446
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15540; Mature: 15540
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICLILLLMKILFLAILICSSFLFPSSSFASHVELKPCVEIAHCVREEWKVNNIEKPFEE CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH IKTFIENTPRTEIVEIDGDYLHAEATSKWMKYVDDLEVSFLPESNILSIRSESRVGESDL HHHHHCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCCCCCC GVNQKRVDLLKSKMF CCCHHHHHHHHHCCC >Mature Secondary Structure MICLILLLMKILFLAILICSSFLFPSSSFASHVELKPCVEIAHCVREEWKVNNIEKPFEE CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH IKTFIENTPRTEIVEIDGDYLHAEATSKWMKYVDDLEVSFLPESNILSIRSESRVGESDL HHHHHCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCCCCCC GVNQKRVDLLKSKMF CCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA