Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696447
Identifier: 126696447
GI number: 126696447
Start: 941763
End: 942305
Strand: Reverse
Name: 126696447
Synonym: P9301_11091
Alternate gene names: NA
Gene position: 942305-941763 (Counterclockwise)
Preceding gene: 126696450
Following gene: 126696444
Centisome position: 57.39
GC content: 26.7
Gene sequence:
>543_bases ATGGAAACCGAAAATAATTTATTAAATTTACTTCTTAAATCTCCAAATTCAGAGAGTATACGTACTATTGCCGAACAACT TGAAATTGATCATAATTTTTCCTTTAGCAAAGATAAAAATGATTTACAGGGTGTTTGGGAGCTTAGGTGGAGTAGTTCTA ATAGTCCTTTTTTAAAATATTCTCCTTTTATTGATAACCTTCAAATTCTTGATCCCTTAAATTTAAATGGTCTTAATTTA CTTAAACCTAGAGGAATAAAATCAATTATTGGTACTGGTATTTTAATAAGACTTAATTACATAGATGAAAAAAAAATTGG GGTCAAATTTACACATGCTGGCGTTATAGGTCCTAAATTTGGAAGAAAAAATATAAAGGCTATGAAAGAAATAAATAATG AACAATTAGGGTGGTTAGAGATAACTTATTTAAGTAATAAGCTGAGAATCTGTAGAGGTGATAAAGGAACTTTATTTGTT TTAAGAAAAATAAATTCAACGACTTTATTCAAGAATTTCAAGGAATTTTTAAAATCTATTTAA
Upstream 100 bases:
>100_bases TAGCCAATAGCTCTTTGTCATCAAATCAAGATATTCTGGATAGAATATAGCATATGGAGGTAAGTATTTATCCTTAGCTA TATACTCCAACGTTTATTAA
Downstream 100 bases:
>100_bases AATATAAATTAATTCTTTATCCAAATAGACTTTAAAACGAAATAAATTGGTAAATATTTGAATGATTCTTTTGGTATTTC ATAGCTTAAGAATATTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues METENNLLNLLLKSPNSESIRTIAEQLEIDHNFSFSKDKNDLQGVWELRWSSSNSPFLKYSPFIDNLQILDPLNLNGLNL LKPRGIKSIIGTGILIRLNYIDEKKIGVKFTHAGVIGPKFGRKNIKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFV LRKINSTTLFKNFKEFLKSI
Sequences:
>Translated_180_residues METENNLLNLLLKSPNSESIRTIAEQLEIDHNFSFSKDKNDLQGVWELRWSSSNSPFLKYSPFIDNLQILDPLNLNGLNL LKPRGIKSIIGTGILIRLNYIDEKKIGVKFTHAGVIGPKFGRKNIKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFV LRKINSTTLFKNFKEFLKSI >Mature_180_residues METENNLLNLLLKSPNSESIRTIAEQLEIDHNFSFSKDKNDLQGVWELRWSSSNSPFLKYSPFIDNLQILDPLNLNGLNL LKPRGIKSIIGTGILIRLNYIDEKKIGVKFTHAGVIGPKFGRKNIKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFV LRKINSTTLFKNFKEFLKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20652; Mature: 20652
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METENNLLNLLLKSPNSESIRTIAEQLEIDHNFSFSKDKNDLQGVWELRWSSSNSPFLKY CCCCCCEEEHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEE SPFIDNLQILDPLNLNGLNLLKPRGIKSIIGTGILIRLNYIDEKKIGVKFTHAGVIGPKF CCCCCCEEEECCCCCCCCEEECCCCHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCC GRKNIKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFVLRKINSTTLFKNFKEFLKSI CCHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure METENNLLNLLLKSPNSESIRTIAEQLEIDHNFSFSKDKNDLQGVWELRWSSSNSPFLKY CCCCCCEEEHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEE SPFIDNLQILDPLNLNGLNLLKPRGIKSIIGTGILIRLNYIDEKKIGVKFTHAGVIGPKF CCCCCCEEEECCCCCCCCEEECCCCHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCC GRKNIKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFVLRKINSTTLFKNFKEFLKSI CCHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA