Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696435
Identifier: 126696435
GI number: 126696435
Start: 936083
End: 936475
Strand: Reverse
Name: 126696435
Synonym: P9301_10971
Alternate gene names: NA
Gene position: 936475-936083 (Counterclockwise)
Preceding gene: 126696438
Following gene: 126696434
Centisome position: 57.04
GC content: 27.99
Gene sequence:
>393_bases TTGTTTATATTAGTATCTATTTTTCTCCCAATAATTTTTTTTATTGCACCCATAAATGTAATAGCTATTCAAAGTAATTT AGATTTATCGAGTGCTCAAACTTCTGTAGGCAAAAGATTTGCTAAGGTTTTCTGTGATGCTAAGAGGGAAGGATTAGATT CTGATTTTGCTAGTGAATATGCTTTGAATAATACATATTTAAAATTTGTAGCCTTCCCAGACGATGACGAATATTTGGAT AATTTATGGAATTTCACCCATAATAATATATTAGATAATTGCGGTGAATTTGTAGATATAAATGATCTAAAAGACCTAGA GTTATTTTTTAAAGAAGAAGGTTTAATTGCATCAAATAGAGAACTTTACTTACCAACTTTTGAGAATAATTAG
Upstream 100 bases:
>100_bases ATTTCTTAATTTATAATTAAGTGCTTTTACTTAAATATGCCTAATTGATTAATTTTTTTGCTAGTTTATGTTGAGTAAAA ATTAAAAAAAGGAAATTTTT
Downstream 100 bases:
>100_bases ATTAAATTTTTAGCATGTACTAATATATAAATAGAATATGAAATTTTATGAAACTATTAGGTTTAAATTCACCTGAAATA TTCATAATTTTTGTAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MFILVSIFLPIIFFIAPINVIAIQSNLDLSSAQTSVGKRFAKVFCDAKREGLDSDFASEYALNNTYLKFVAFPDDDEYLD NLWNFTHNNILDNCGEFVDINDLKDLELFFKEEGLIASNRELYLPTFENN
Sequences:
>Translated_130_residues MFILVSIFLPIIFFIAPINVIAIQSNLDLSSAQTSVGKRFAKVFCDAKREGLDSDFASEYALNNTYLKFVAFPDDDEYLD NLWNFTHNNILDNCGEFVDINDLKDLELFFKEEGLIASNRELYLPTFENN >Mature_130_residues MFILVSIFLPIIFFIAPINVIAIQSNLDLSSAQTSVGKRFAKVFCDAKREGLDSDFASEYALNNTYLKFVAFPDDDEYLD NLWNFTHNNILDNCGEFVDINDLKDLELFFKEEGLIASNRELYLPTFENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14920; Mature: 14920
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFILVSIFLPIIFFIAPINVIAIQSNLDLSSAQTSVGKRFAKVFCDAKREGLDSDFASEY CEEHHHHHHHHHHHHHCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ALNNTYLKFVAFPDDDEYLDNLWNFTHNNILDNCGEFVDINDLKDLELFFKEEGLIASNR HCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHCCCEECCCCCHHHHHHHHCCCCEECCC ELYLPTFENN EEEECCCCCC >Mature Secondary Structure MFILVSIFLPIIFFIAPINVIAIQSNLDLSSAQTSVGKRFAKVFCDAKREGLDSDFASEY CEEHHHHHHHHHHHHHCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ALNNTYLKFVAFPDDDEYLDNLWNFTHNNILDNCGEFVDINDLKDLELFFKEEGLIASNR HCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHCCCEECCCCCHHHHHHHHCCCCEECCC ELYLPTFENN EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA