Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is cbbY [H]
Identifier: 126696355
GI number: 126696355
Start: 877514
End: 878275
Strand: Reverse
Name: cbbY [H]
Synonym: P9301_10171
Alternate gene names: 126696355
Gene position: 878275-877514 (Counterclockwise)
Preceding gene: 126696366
Following gene: 126696354
Centisome position: 53.49
GC content: 29.13
Gene sequence:
>762_bases GTGACGAATCTTGAGGGTGTTTATTGGGATTTGGATGGTACCATCGCAAATACTGAATTAGAGGCCCATTTACCTGCTTT TAATAATGCTTTCAATGACCTTGGAATTGATTGGAATTGGGACACTAAAAAATACATACAACTTCTAAAGATAAATGGGG GCAAAAATAGGATTTCTTATTTCGCTAAATCTAATAAAGATGATTTCTCAGAAGATTTAATTCTCAAAATTCATGAAACA AAGCAGTTTCATTATCTAGAAAATATAAAAAAAAATTGCGTTAGTTTAAAAACTGGTGTTTTTAGATTAATAAATGAATT ACATAAAAAAAAAGTTAGACAATTTATTGTTACTTCAAGTTCAAGAATTCAAGTAAATCTTCTTGTTGAATATCTTTTCA ATGGCTTTAACCCTTTTGAGTTCATTATTTCAAGTGAAGACGTTGAATTAAAGAAACCAAATCCATTACCATATTTAAAG GCAATCCAATTAAGTGGTATAAATATAAACAACTCAATTGTCTTTGAAGACTCCAGTCCGGGATTGAAATCTTCCCTGGC AGCTAATTTGCCTACAATTTTTGTTCATTCAAATATCCCAATTGTTCTTGAGGAAAATATTAAATTAAATTGTATTTTAG ACAGCCTTGGTGATGAGAATAATGTGGCAAATGTAATTAAAGGCCCTAAACTAAAAAAATCATATGTTGACTATAACTTT CTAAGTGATTATTTAGTGTCTTTTAGTAATGCAAAAAACTAA
Upstream 100 bases:
>100_bases ATTAATCATGGCAACACTTATTCCTTTGGCTGTAGTTGCGTTAGCAGGACCAGCAATAATTGCTCTTGTATTTTACCGTA AATAAAAGAAATTCTTTTTG
Downstream 100 bases:
>100_bases TTTTTCAAGGATTACCAACCAGTTAAATAATTTATTTTTTGGTTTTCTAAGTGATACTTGGAGAACAAAATCTATTAGTC TAATTTCTGTTTTGACAGGT
Product: putative CbbY-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTNLEGVYWDLDGTIANTELEAHLPAFNNAFNDLGIDWNWDTKKYIQLLKINGGKNRISYFAKSNKDDFSEDLILKIHET KQFHYLENIKKNCVSLKTGVFRLINELHKKKVRQFIVTSSSRIQVNLLVEYLFNGFNPFEFIISSEDVELKKPNPLPYLK AIQLSGININNSIVFEDSSPGLKSSLAANLPTIFVHSNIPIVLEENIKLNCILDSLGDENNVANVIKGPKLKKSYVDYNF LSDYLVSFSNAKN
Sequences:
>Translated_253_residues MTNLEGVYWDLDGTIANTELEAHLPAFNNAFNDLGIDWNWDTKKYIQLLKINGGKNRISYFAKSNKDDFSEDLILKIHET KQFHYLENIKKNCVSLKTGVFRLINELHKKKVRQFIVTSSSRIQVNLLVEYLFNGFNPFEFIISSEDVELKKPNPLPYLK AIQLSGININNSIVFEDSSPGLKSSLAANLPTIFVHSNIPIVLEENIKLNCILDSLGDENNVANVIKGPKLKKSYVDYNF LSDYLVSFSNAKN >Mature_252_residues TNLEGVYWDLDGTIANTELEAHLPAFNNAFNDLGIDWNWDTKKYIQLLKINGGKNRISYFAKSNKDDFSEDLILKIHETK QFHYLENIKKNCVSLKTGVFRLINELHKKKVRQFIVTSSSRIQVNLLVEYLFNGFNPFEFIISSEDVELKKPNPLPYLKA IQLSGININNSIVFEDSSPGLKSSLAANLPTIFVHSNIPIVLEENIKLNCILDSLGDENNVANVIKGPKLKKSYVDYNFL SDYLVSFSNAKN
Specific function: Unknown
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 28809; Mature: 28678
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLEGVYWDLDGTIANTELEAHLPAFNNAFNDLGIDWNWDTKKYIQLLKINGGKNRISY CCCCCEEEEECCCEEECCEEEEECCCHHCHHHHCCCCCCCCHHHEEEEEEECCCCCEEEE FAKSNKDDFSEDLILKIHETKQFHYLENIKKNCVSLKTGVFRLINELHKKKVRQFIVTSS EECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SRIQVNLLVEYLFNGFNPFEFIISSEDVELKKPNPLPYLKAIQLSGININNSIVFEDSSP CEEEEHEEHHHHHCCCCCEEEEEECCCCEEECCCCCCCEEEEEEECCCCCCEEEEECCCC GLKSSLAANLPTIFVHSNIPIVLEENIKLNCILDSLGDENNVANVIKGPKLKKSYVDYNF CHHHHHHCCCCEEEEECCCCEEEECCCEEEEEEECCCCCCCCHHHHCCCCCHHHHCCHHH LSDYLVSFSNAKN HHHHHHHHCCCCC >Mature Secondary Structure TNLEGVYWDLDGTIANTELEAHLPAFNNAFNDLGIDWNWDTKKYIQLLKINGGKNRISY CCCCEEEEECCCEEECCEEEEECCCHHCHHHHCCCCCCCCHHHEEEEEEECCCCCEEEE FAKSNKDDFSEDLILKIHETKQFHYLENIKKNCVSLKTGVFRLINELHKKKVRQFIVTSS EECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SRIQVNLLVEYLFNGFNPFEFIISSEDVELKKPNPLPYLKAIQLSGININNSIVFEDSSP CEEEEHEEHHHHHCCCCCEEEEEECCCCEEECCCCCCCEEEEEEECCCCCCEEEEECCCC GLKSSLAANLPTIFVHSNIPIVLEENIKLNCILDSLGDENNVANVIKGPKLKKSYVDYNF CHHHHHHCCCCEEEEECCCCEEEECCCEEEEEEECCCCCCCCHHHHCCCCCHHHHCCHHH LSDYLVSFSNAKN HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA