Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is bcp [H]
Identifier: 126696294
GI number: 126696294
Start: 823157
End: 823690
Strand: Reverse
Name: bcp [H]
Synonym: P9301_09561
Alternate gene names: 126696294
Gene position: 823690-823157 (Counterclockwise)
Preceding gene: 126696295
Following gene: 126696293
Centisome position: 50.17
GC content: 29.96
Gene sequence:
>534_bases ATGAGAAGTTTAGTTGTAAGTATATTAATACCATTTATTATTTTATTTAATTGTTATTCAGCCTTATCTTTTGATTTTGC TCCTGAAGTAGGTGATTATGCTCCTAACTTTAAGTTAGAAGGTTTTAATAAAAACATAAAAACAAAAAAAACATGGGAAT TAAGTGATTTTGAAGGTCAGTGGCTAGTTATGTATTTTTATCCAAAAGACTTTACAGCAGGTTGCACTCTTGAAGCTAAA GGTTTTTCAGAATTAAAAAAAGATTTTTCAAAATATAATGCCGAAATTGTTGGGATTAGCGCAGATAATGAAGATTCTCA TGAAAGTTTCTGCAGCGAGAGATCCATAAACTACACTTTATTATCTGATCCTGACGGAATTATTAGTGATAAATATGGTT CCTGGATTCCTCCATTCTCAGATAGAAATACTTTTTTGATTTCTCCAGATGGGAAAATTAGTTACAGATGGATTAGTGTT CTACCTTTAAATCATGCCAAAGAAGTCCTCAACGTTTTAAAGAAAAAAATATAA
Upstream 100 bases:
>100_bases ATATAAAAATAAGTACCAAAGCCCTAAAGTCTATTCAAAAAGTAGGTTTAGATAAATTTGCTAAATCAAATGGAGTTGAT TTAAATAAATTCTAAATTTG
Downstream 100 bases:
>100_bases AATTTTGCACGAATTATCTTTTGTAACTTGGTTAATACATATCTCATCAGTAATAGAATGGATTTTTGCCATATTAGTCA TAAATAAAATTTCTACATAT
Product: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQWLVMYFYPKDFTAGCTLEAK GFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTLLSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISV LPLNHAKEVLNVLKKKI
Sequences:
>Translated_177_residues MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQWLVMYFYPKDFTAGCTLEAK GFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTLLSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISV LPLNHAKEVLNVLKKKI >Mature_177_residues MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQWLVMYFYPKDFTAGCTLEAK GFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTLLSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISV LPLNHAKEVLNVLKKKI
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI5802974, Length=166, Percent_Identity=33.1325301204819, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI32483377, Length=135, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=7e-13, Organism=Homo sapiens, GI4505591, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI32455266, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI32455264, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI32189392, Length=159, Percent_Identity=31.4465408805031, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1788825, Length=155, Percent_Identity=34.1935483870968, Blast_Score=88, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17554494, Length=130, Percent_Identity=32.3076923076923, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322180, Length=154, Percent_Identity=34.4155844155844, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI17738015, Length=158, Percent_Identity=35.4430379746835, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17157991, Length=163, Percent_Identity=31.9018404907975, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641739, Length=163, Percent_Identity=31.9018404907975, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 20239; Mature: 20239
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQ CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCC WLVMYFYPKDFTAGCTLEAKGFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTL EEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEE LSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISVLPLNHAKEVLNVLKKKI ECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHCC >Mature Secondary Structure MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQ CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCC WLVMYFYPKDFTAGCTLEAKGFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTL EEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEE LSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISVLPLNHAKEVLNVLKKKI ECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]