Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is bcp [H]

Identifier: 126696294

GI number: 126696294

Start: 823157

End: 823690

Strand: Reverse

Name: bcp [H]

Synonym: P9301_09561

Alternate gene names: 126696294

Gene position: 823690-823157 (Counterclockwise)

Preceding gene: 126696295

Following gene: 126696293

Centisome position: 50.17

GC content: 29.96

Gene sequence:

>534_bases
ATGAGAAGTTTAGTTGTAAGTATATTAATACCATTTATTATTTTATTTAATTGTTATTCAGCCTTATCTTTTGATTTTGC
TCCTGAAGTAGGTGATTATGCTCCTAACTTTAAGTTAGAAGGTTTTAATAAAAACATAAAAACAAAAAAAACATGGGAAT
TAAGTGATTTTGAAGGTCAGTGGCTAGTTATGTATTTTTATCCAAAAGACTTTACAGCAGGTTGCACTCTTGAAGCTAAA
GGTTTTTCAGAATTAAAAAAAGATTTTTCAAAATATAATGCCGAAATTGTTGGGATTAGCGCAGATAATGAAGATTCTCA
TGAAAGTTTCTGCAGCGAGAGATCCATAAACTACACTTTATTATCTGATCCTGACGGAATTATTAGTGATAAATATGGTT
CCTGGATTCCTCCATTCTCAGATAGAAATACTTTTTTGATTTCTCCAGATGGGAAAATTAGTTACAGATGGATTAGTGTT
CTACCTTTAAATCATGCCAAAGAAGTCCTCAACGTTTTAAAGAAAAAAATATAA

Upstream 100 bases:

>100_bases
ATATAAAAATAAGTACCAAAGCCCTAAAGTCTATTCAAAAAGTAGGTTTAGATAAATTTGCTAAATCAAATGGAGTTGAT
TTAAATAAATTCTAAATTTG

Downstream 100 bases:

>100_bases
AATTTTGCACGAATTATCTTTTGTAACTTGGTTAATACATATCTCATCAGTAATAGAATGGATTTTTGCCATATTAGTCA
TAAATAAAATTTCTACATAT

Product: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQWLVMYFYPKDFTAGCTLEAK
GFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTLLSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISV
LPLNHAKEVLNVLKKKI

Sequences:

>Translated_177_residues
MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQWLVMYFYPKDFTAGCTLEAK
GFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTLLSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISV
LPLNHAKEVLNVLKKKI
>Mature_177_residues
MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQWLVMYFYPKDFTAGCTLEAK
GFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTLLSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISV
LPLNHAKEVLNVLKKKI

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI5802974, Length=166, Percent_Identity=33.1325301204819, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI32483377, Length=135, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=7e-13,
Organism=Homo sapiens, GI4505591, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI32455266, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI32455264, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI32189392, Length=159, Percent_Identity=31.4465408805031, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1788825, Length=155, Percent_Identity=34.1935483870968, Blast_Score=88, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17554494, Length=130, Percent_Identity=32.3076923076923, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322180, Length=154, Percent_Identity=34.4155844155844, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17738015, Length=158, Percent_Identity=35.4430379746835, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17157991, Length=163, Percent_Identity=31.9018404907975, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24641739, Length=163, Percent_Identity=31.9018404907975, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 20239; Mature: 20239

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCC
WLVMYFYPKDFTAGCTLEAKGFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTL
EEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEE
LSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISVLPLNHAKEVLNVLKKKI
ECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSLVVSILIPFIILFNCYSALSFDFAPEVGDYAPNFKLEGFNKNIKTKKTWELSDFEGQ
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCC
WLVMYFYPKDFTAGCTLEAKGFSELKKDFSKYNAEIVGISADNEDSHESFCSERSINYTL
EEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEE
LSDPDGIISDKYGSWIPPFSDRNTFLISPDGKISYRWISVLPLNHAKEVLNVLKKKI
ECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]