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The map label for this gene is rpe [H]

Identifier: 126696164

GI number: 126696164

Start: 716716

End: 717474

Strand: Reverse

Name: rpe [H]

Synonym: P9301_08261

Alternate gene names: 126696164

Gene position: 717474-716716 (Counterclockwise)

Preceding gene: 126696172

Following gene: 126696158

Centisome position: 43.7

GC content: 37.29

Gene sequence:

>759_bases
ATGACTGAGTCAAATCAAACAATTTTAGCTGGTGTTAATAGACCAATTCAAATAATTCCTTCAGTTTTACCAGCAGATTG
GGCAAATATGGGGGCTTGTGTGAAAGAGCTCGAGGAAGCTGGGGTAGATAGAATTCAATTTGATGTAATGGATGGGAATT
TTGTGCCAAATCTTACATTCGGTCCTGAAATGATTGCTGCATGCAGGAAATATTGCAATGTCCCTTTTGAAACACAATTA
ATGGTGAGCCAATACAACTGTGAAACTATGCTTGAATCTTACGTAAACGCCACAAAAGGGGCGAATGGTGAACCAGGAGT
AGTAATAGCTCATGCCGAAGCAAATATTCATTTGCATAGAGTTCTCGGGAGAATAAGAGATCTAGGAGGATCTCCTTCTG
TTGCTTTAAACCCACATACTCCTTTTGAAATGATTAAAAACATTATGGATATGGTTGATCATGTTTTGGTTATGACAGTT
AATCCAGGATTTGGAGGACAAGCTTACATACCAACAATGCTTAATAAAATCAGAGAAATAAGAAACTTTATTATCGAAAA
AAACTTAAATGTCGACATTGAAGTTGATGGTGGGATAAAAGCAAATTGGACTATTTCACAATGTGCCCATGCTGGTGCTA
ATTGTTTTATTGCAGGTAGCGGAATGTTTGCTTACCCAACATTAAAAGAAGGATGTGATGACTTGAGAAAAGTTGCACAA
GAAGCACAAAAAGGGGATGTTCTTTCAGAACCTCAATAA

Upstream 100 bases:

>100_bases
TTTTTTTAACTCTTTACACGTGATACTTTATCAGGCCGTGACTTGAAATTAGGAATAAACAACTAAATATAGTATCTTTA
TTAAATATTTTAAAAATTAA

Downstream 100 bases:

>100_bases
ATATTCTGGATGATTAAGAAATCATCCAAATATCCATCCATAACTATGCAACCCTATTCCTAAAAAATTAACTCCTAAAT
AACATACTAAAACAACTAAA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTESNQTILAGVNRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCNVPFETQL
MVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTV
NPGFGGQAYIPTMLNKIREIRNFIIEKNLNVDIEVDGGIKANWTISQCAHAGANCFIAGSGMFAYPTLKEGCDDLRKVAQ
EAQKGDVLSEPQ

Sequences:

>Translated_252_residues
MTESNQTILAGVNRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCNVPFETQL
MVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTV
NPGFGGQAYIPTMLNKIREIRNFIIEKNLNVDIEVDGGIKANWTISQCAHAGANCFIAGSGMFAYPTLKEGCDDLRKVAQ
EAQKGDVLSEPQ
>Mature_251_residues
TESNQTILAGVNRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCNVPFETQLM
VSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTVN
PGFGGQAYIPTMLNKIREIRNFIIEKNLNVDIEVDGGIKANWTISQCAHAGANCFIAGSGMFAYPTLKEGCDDLRKVAQE
AQKGDVLSEPQ

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=232, Percent_Identity=34.9137931034483, Blast_Score=121, Evalue=5e-28,
Organism=Homo sapiens, GI219879828, Length=230, Percent_Identity=33.0434782608696, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI24307923, Length=115, Percent_Identity=35.6521739130435, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1789788, Length=229, Percent_Identity=39.3013100436681, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1790523, Length=210, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1790754, Length=180, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17552948, Length=215, Percent_Identity=36.7441860465116, Blast_Score=117, Evalue=7e-27,
Organism=Saccharomyces cerevisiae, GI6322341, Length=219, Percent_Identity=32.8767123287671, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24586301, Length=233, Percent_Identity=37.3390557939914, Blast_Score=131, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 27536; Mature: 27405

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESNQTILAGVNRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTF
CCCCCCEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GPEMIAACRKYCNVPFETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHR
CHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
VLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREI
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH
RNFIIEKNLNVDIEVDGGIKANWTISQCAHAGANCFIAGSGMFAYPTLKEGCDDLRKVAQ
HHHHHHCCCCEEEEECCCEEECEEHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHH
EAQKGDVLSEPQ
HHHCCCCCCCCC
>Mature Secondary Structure 
TESNQTILAGVNRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTF
CCCCCEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GPEMIAACRKYCNVPFETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHR
CHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
VLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREI
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH
RNFIIEKNLNVDIEVDGGIKANWTISQCAHAGANCFIAGSGMFAYPTLKEGCDDLRKVAQ
HHHHHHCCCCEEEEECCCEEECEEHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHH
EAQKGDVLSEPQ
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA