Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
---|---|
Accession | NC_009091 |
Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126696135
Identifier: 126696135
GI number: 126696135
Start: 688067
End: 688504
Strand: Reverse
Name: 126696135
Synonym: P9301_07971
Alternate gene names: NA
Gene position: 688504-688067 (Counterclockwise)
Preceding gene: 126696137
Following gene: 126696134
Centisome position: 41.93
GC content: 22.37
Gene sequence:
>438_bases ATGAGTAAAAAAGAAACAACTAATTCTAAAGAGGTTAGAAAGCAAGATTATGAGGCCCAAAAAATGAATAGTTCCCAAAA ATTCAAGAAAAAGACAGATAAGAATCTTCCTTGGTGGGTAGAGTTATTGTTTGTTCAAATAGGATTGCCAGATAAATTAC TAATAAAAATATTAAAAGCAAAAAAATCTTCTAAAGAATTTATTAAAAATGATAAAAAATCATTAATAACATCTTTGTTT GTAATTACTACATTTGCATATTTTTATCCAGTTATTAAACATGCAAAAAACAAATTAGATTGTGAATCTATTGCCAAAAA TTATATTATTAAAAATAAAAATATAATTGAAATCAATAATAGGGAATTAAAAATGCTATCTACAAATTTTTGTTATGGTG GCGAAGAAATATATGAAATAGAAAATTTAAAAAATTAA
Upstream 100 bases:
>100_bases ACTAAAATTCATAGATAAATTAAATTAAAACTTATAAAATAAAAATATAGTTTCCAAATCAAAATAAAACCTCTACATTC CAAATAAATCATTCGATGAT
Downstream 100 bases:
>100_bases ATCTTAAATTATTTTCTATTAATAACCATTCCAATATTATGATAGTAACTTCAAGTTTAATAAAGATTAAATTTTAATTC TATGACTGATACAAAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSKKETTNSKEVRKQDYEAQKMNSSQKFKKKTDKNLPWWVELLFVQIGLPDKLLIKILKAKKSSKEFIKNDKKSLITSLF VITTFAYFYPVIKHAKNKLDCESIAKNYIIKNKNIIEINNRELKMLSTNFCYGGEEIYEIENLKN
Sequences:
>Translated_145_residues MSKKETTNSKEVRKQDYEAQKMNSSQKFKKKTDKNLPWWVELLFVQIGLPDKLLIKILKAKKSSKEFIKNDKKSLITSLF VITTFAYFYPVIKHAKNKLDCESIAKNYIIKNKNIIEINNRELKMLSTNFCYGGEEIYEIENLKN >Mature_144_residues SKKETTNSKEVRKQDYEAQKMNSSQKFKKKTDKNLPWWVELLFVQIGLPDKLLIKILKAKKSSKEFIKNDKKSLITSLFV ITTFAYFYPVIKHAKNKLDCESIAKNYIIKNKNIIEINNRELKMLSTNFCYGGEEIYEIENLKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17091; Mature: 16960
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKETTNSKEVRKQDYEAQKMNSSQKFKKKTDKNLPWWVELLFVQIGLPDKLLIKILKA CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH KKSSKEFIKNDKKSLITSLFVITTFAYFYPVIKHAKNKLDCESIAKNYIIKNKNIIEINN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEECC RELKMLSTNFCYGGEEIYEIENLKN CEEEEEECCCCCCCHHHHHHCCCCC >Mature Secondary Structure SKKETTNSKEVRKQDYEAQKMNSSQKFKKKTDKNLPWWVELLFVQIGLPDKLLIKILKA CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHH KKSSKEFIKNDKKSLITSLFVITTFAYFYPVIKHAKNKLDCESIAKNYIIKNKNIIEINN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEECC RELKMLSTNFCYGGEEIYEIENLKN CEEEEEECCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA