Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696036
Identifier: 126696036
GI number: 126696036
Start: 622546
End: 623151
Strand: Reverse
Name: 126696036
Synonym: P9301_06981
Alternate gene names: NA
Gene position: 623151-622546 (Counterclockwise)
Preceding gene: 126696037
Following gene: 126696035
Centisome position: 37.95
GC content: 29.87
Gene sequence:
>606_bases ATGAATCTAAATTTTTTCATACAAAAGATAAAAAATGATAATGCAGGTTTTACTCTCGTAGAATTAATAATTACAGTTGG AATGATGAGTGTTTTATCCGGTGCAATATTCCCAAGTTTTCTAAATTGGATTAGGACTGAAAAAGTAAACTCTTACACAA GAGAGTTAAAAGAATATTTTCGTGTTATAAAGCTAGATGCTAGGAGGTGGGGATCGAGTTGCTCGATTGATATAAACAGA ATAGGGGCTAATGGAGTTTTTAATGATAAAAAATACTATGGCTACGAAGTAACATGTACCGATCGTAATACCACGATAAA TAATATGGCTCCAGCATTAAATAATTCTATTTTTCAAGTTGTAAATAAAGAATTTTTAATTACGCCAAATGGAAGAATCA GTTCCGACGAATCAATTGTCATTGTAATTGGATCTAAATACTATAATTCAGGAGTAAAAATGCTGAATTGTCTTGTTATA CAATCTCCAACAGGTCACATTGTAAAAGGAAAATTTATTGAGGATGATTGGATTACAAATAATATGGAAGTAAGTCAAAA AGATAGCAATAATATTCTCACAAAAGACAAATGCGAATTTATTTAA
Upstream 100 bases:
>100_bases CTCTCAACTATAGGGTTGAATGGGGATCAGAAAATAAACATTGGTTAAGTATTGATTTAACTGCCGAAGCACATAGTTGG TGCGAACAAATAATTTAAAA
Downstream 100 bases:
>100_bases ATGATGAATATTAAAATGCCCCAAAAAGATGGATTTTCCATAATTGAGCTAATAATAGCAGGTGCAATTTCTGTTACAGC AATAGGCGTAGGGTTTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MNLNFFIQKIKNDNAGFTLVELIITVGMMSVLSGAIFPSFLNWIRTEKVNSYTRELKEYFRVIKLDARRWGSSCSIDINR IGANGVFNDKKYYGYEVTCTDRNTTINNMAPALNNSIFQVVNKEFLITPNGRISSDESIVIVIGSKYYNSGVKMLNCLVI QSPTGHIVKGKFIEDDWITNNMEVSQKDSNNILTKDKCEFI
Sequences:
>Translated_201_residues MNLNFFIQKIKNDNAGFTLVELIITVGMMSVLSGAIFPSFLNWIRTEKVNSYTRELKEYFRVIKLDARRWGSSCSIDINR IGANGVFNDKKYYGYEVTCTDRNTTINNMAPALNNSIFQVVNKEFLITPNGRISSDESIVIVIGSKYYNSGVKMLNCLVI QSPTGHIVKGKFIEDDWITNNMEVSQKDSNNILTKDKCEFI >Mature_201_residues MNLNFFIQKIKNDNAGFTLVELIITVGMMSVLSGAIFPSFLNWIRTEKVNSYTRELKEYFRVIKLDARRWGSSCSIDINR IGANGVFNDKKYYGYEVTCTDRNTTINNMAPALNNSIFQVVNKEFLITPNGRISSDESIVIVIGSKYYNSGVKMLNCLVI QSPTGHIVKGKFIEDDWITNNMEVSQKDSNNILTKDKCEFI
Specific function: Unknown
COG id: COG4970
COG function: function code NU; Tfp pilus assembly protein FimT
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22866; Mature: 22866
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNFFIQKIKNDNAGFTLVELIITVGMMSVLSGAIFPSFLNWIRTEKVNSYTRELKEYF CCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVIKLDARRWGSSCSIDINRIGANGVFNDKKYYGYEVTCTDRNTTINNMAPALNNSIFQV HHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEECEEEEECCCCCCHHHHHHHHHHHHHHH VNKEFLITPNGRISSDESIVIVIGSKYYNSGVKMLNCLVIQSPTGHIVKGKFIEDDWITN HCCCEEECCCCCCCCCCEEEEEECCCHHHCCCEEEEEEEEECCCCCEEECEEECCCCCCC NMEVSQKDSNNILTKDKCEFI CCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLNFFIQKIKNDNAGFTLVELIITVGMMSVLSGAIFPSFLNWIRTEKVNSYTRELKEYF CCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVIKLDARRWGSSCSIDINRIGANGVFNDKKYYGYEVTCTDRNTTINNMAPALNNSIFQV HHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEECEEEEECCCCCCHHHHHHHHHHHHHHH VNKEFLITPNGRISSDESIVIVIGSKYYNSGVKMLNCLVIQSPTGHIVKGKFIEDDWITN HCCCEEECCCCCCCCCCEEEEEECCCHHHCCCEEEEEEEEECCCCCEEECEEECCCCCCC NMEVSQKDSNNILTKDKCEFI CCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA