Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696024
Identifier: 126696024
GI number: 126696024
Start: 608804
End: 609400
Strand: Reverse
Name: 126696024
Synonym: P9301_06861
Alternate gene names: NA
Gene position: 609400-608804 (Counterclockwise)
Preceding gene: 126696025
Following gene: 126696023
Centisome position: 37.12
GC content: 34.17
Gene sequence:
>597_bases ATGATTAAAAAATCTATTTTATTATTATTATTAGTATCTAGCTCAATAGTGCTTCCAGTAAAATCTGATTTTGGAGATGC AGACTTTAGAGAGGATATAGAGTCTGGTGGACCAAAAAGTTATCACGATGCTTGGTGTCGACAAATAAAAAATAAATGCC GCGTAAGATTTCAGGGTCGCTCAATGTGGGTAGAAGGACAAGGAGGAATAGATAGATCCCAATTCATATCGGTAAGAAGA GAGACAGAAGGTTATGCAGGTTGGAGTTCTCAGCCCGCAGAATATTATTACTACATAAGATATCTTTCATCTAATAATAA TGAGAAAATTGCTCTTTTCCTTTTTTCAAATAAAAAAGCAGGTAGAGATTTTGGAAAAGCAATTGTTCGTTTTAAGTCAC AAGATGCAAAGCCTATACCTAATTACCGTTTCCCAAACAGCCAAGGTCCACAAGATACTCACGGTAGAGACAAAAATCTA AATCCTTACGATAACGATCTAATAGAAGATTGGTCTTTAGAATCCACAAAAAAAGGAAAGAAAGGAAATATAAATTGTGA TTCTCCTGTATGGAAGAATAAACCTAGATGTAATTAA
Upstream 100 bases:
>100_bases AAAGTATGGAAAGATGCCAAGAAGCAGAATTAGAACTTGAGTCTAGTGATGGCTTTGCAGGTAGAAATCGTTTTTTCTTT ACGATGTGTATTGATGCAAG
Downstream 100 bases:
>100_bases TGAAATACTTACTACTCTCACTGCTAGCTGCTTTCGCTTTACCTATAGAGGTAAATGCTGAGGATAAAGATTTTGAAAGG TGGAAAGAAAGTTACTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MIKKSILLLLLVSSSIVLPVKSDFGDADFREDIESGGPKSYHDAWCRQIKNKCRVRFQGRSMWVEGQGGIDRSQFISVRR ETEGYAGWSSQPAEYYYYIRYLSSNNNEKIALFLFSNKKAGRDFGKAIVRFKSQDAKPIPNYRFPNSQGPQDTHGRDKNL NPYDNDLIEDWSLESTKKGKKGNINCDSPVWKNKPRCN
Sequences:
>Translated_198_residues MIKKSILLLLLVSSSIVLPVKSDFGDADFREDIESGGPKSYHDAWCRQIKNKCRVRFQGRSMWVEGQGGIDRSQFISVRR ETEGYAGWSSQPAEYYYYIRYLSSNNNEKIALFLFSNKKAGRDFGKAIVRFKSQDAKPIPNYRFPNSQGPQDTHGRDKNL NPYDNDLIEDWSLESTKKGKKGNINCDSPVWKNKPRCN >Mature_198_residues MIKKSILLLLLVSSSIVLPVKSDFGDADFREDIESGGPKSYHDAWCRQIKNKCRVRFQGRSMWVEGQGGIDRSQFISVRR ETEGYAGWSSQPAEYYYYIRYLSSNNNEKIALFLFSNKKAGRDFGKAIVRFKSQDAKPIPNYRFPNSQGPQDTHGRDKNL NPYDNDLIEDWSLESTKKGKKGNINCDSPVWKNKPRCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22772; Mature: 22772
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKSILLLLLVSSSIVLPVKSDFGDADFREDIESGGPKSYHDAWCRQIKNKCRVRFQGR CCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCEEEECCC SMWVEGQGGIDRSQFISVRRETEGYAGWSSQPAEYYYYIRYLSSNNNEKIALFLFSNKKA EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCC GRDFGKAIVRFKSQDAKPIPNYRFPNSQGPQDTHGRDKNLNPYDNDLIEDWSLESTKKGK CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC KGNINCDSPVWKNKPRCN CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKKSILLLLLVSSSIVLPVKSDFGDADFREDIESGGPKSYHDAWCRQIKNKCRVRFQGR CCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCEEEECCC SMWVEGQGGIDRSQFISVRRETEGYAGWSSQPAEYYYYIRYLSSNNNEKIALFLFSNKKA EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCC GRDFGKAIVRFKSQDAKPIPNYRFPNSQGPQDTHGRDKNLNPYDNDLIEDWSLESTKKGK CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC KGNINCDSPVWKNKPRCN CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA