Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695951
Identifier: 126695951
GI number: 126695951
Start: 537680
End: 538099
Strand: Reverse
Name: 126695951
Synonym: P9301_06131
Alternate gene names: NA
Gene position: 538099-537680 (Counterclockwise)
Preceding gene: 126695952
Following gene: 126695950
Centisome position: 32.77
GC content: 28.33
Gene sequence:
>420_bases ATGGGAAGTAAAACCTTTTTAGATTTTTTGCCAACTAATTTTAGACATGAGAAATCTTTTTTTATTCAAAATAATCTAAC TGACTTTGAAAAATTAAGTAATCTTTCGGACTTAGATATAAATGAGATTCAAAGAAAATCTTCACTTTGTACATTGAATA ATCTAAAGAAAATTAGAGCTATAGCCATTTTTAAAAAAGAAATTGGAATTTCTCCACCGCAAGCATATCTACTTTTACAT TGCGGTATTTCCTCTCTTAAATCATTATCACAATCTACCCCTTACGAATTAGAACGGAAAATTGGTAGATTAGAAAGAAT TCTTAGAGTAAAAACTGAGACAAGCACAACTTTTACTCTCTTAAAAGAATGGATTAAAAAAGCTAGTCAAATCGACAAAT CTATTGGAAATCTTGGATAA
Upstream 100 bases:
>100_bases TAAAGATAAGAAAAATTGAAAAAATTTCAGATGGTGTAAGTAAACCAGTGGTTATTGGAGAAGTTCAGAAAAATGTCAAA ATGAATTAGTCTGTTGAAAA
Downstream 100 bases:
>100_bases AAAAATTTTTTAATGTAGAATTTAAAAAAAGGCAGTGATAATGAAACCTTTGTTATTTTTTTTATTTTTGTTTTCCAGCT CTTTATACCCTGTTTTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MGSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRAIAIFKKEIGISPPQAYLLLH CGISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTLLKEWIKKASQIDKSIGNLG
Sequences:
>Translated_139_residues MGSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRAIAIFKKEIGISPPQAYLLLH CGISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTLLKEWIKKASQIDKSIGNLG >Mature_138_residues GSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRAIAIFKKEIGISPPQAYLLLHC GISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTLLKEWIKKASQIDKSIGNLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15906; Mature: 15775
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRA CCCCHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH IAIFKKEIGISPPQAYLLLHCGISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTL HHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LKEWIKKASQIDKSIGNLG HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRA CCCHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH IAIFKKEIGISPPQAYLLLHCGISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTL HHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LKEWIKKASQIDKSIGNLG HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA