Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126695951

Identifier: 126695951

GI number: 126695951

Start: 537680

End: 538099

Strand: Reverse

Name: 126695951

Synonym: P9301_06131

Alternate gene names: NA

Gene position: 538099-537680 (Counterclockwise)

Preceding gene: 126695952

Following gene: 126695950

Centisome position: 32.77

GC content: 28.33

Gene sequence:

>420_bases
ATGGGAAGTAAAACCTTTTTAGATTTTTTGCCAACTAATTTTAGACATGAGAAATCTTTTTTTATTCAAAATAATCTAAC
TGACTTTGAAAAATTAAGTAATCTTTCGGACTTAGATATAAATGAGATTCAAAGAAAATCTTCACTTTGTACATTGAATA
ATCTAAAGAAAATTAGAGCTATAGCCATTTTTAAAAAAGAAATTGGAATTTCTCCACCGCAAGCATATCTACTTTTACAT
TGCGGTATTTCCTCTCTTAAATCATTATCACAATCTACCCCTTACGAATTAGAACGGAAAATTGGTAGATTAGAAAGAAT
TCTTAGAGTAAAAACTGAGACAAGCACAACTTTTACTCTCTTAAAAGAATGGATTAAAAAAGCTAGTCAAATCGACAAAT
CTATTGGAAATCTTGGATAA

Upstream 100 bases:

>100_bases
TAAAGATAAGAAAAATTGAAAAAATTTCAGATGGTGTAAGTAAACCAGTGGTTATTGGAGAAGTTCAGAAAAATGTCAAA
ATGAATTAGTCTGTTGAAAA

Downstream 100 bases:

>100_bases
AAAAATTTTTTAATGTAGAATTTAAAAAAAGGCAGTGATAATGAAACCTTTGTTATTTTTTTTATTTTTGTTTTCCAGCT
CTTTATACCCTGTTTTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MGSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRAIAIFKKEIGISPPQAYLLLH
CGISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTLLKEWIKKASQIDKSIGNLG

Sequences:

>Translated_139_residues
MGSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRAIAIFKKEIGISPPQAYLLLH
CGISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTLLKEWIKKASQIDKSIGNLG
>Mature_138_residues
GSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRAIAIFKKEIGISPPQAYLLLHC
GISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTLLKEWIKKASQIDKSIGNLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15906; Mature: 15775

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRA
CCCCHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IAIFKKEIGISPPQAYLLLHCGISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTL
HHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
LKEWIKKASQIDKSIGNLG
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GSKTFLDFLPTNFRHEKSFFIQNNLTDFEKLSNLSDLDINEIQRKSSLCTLNNLKKIRA
CCCHHHHHCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IAIFKKEIGISPPQAYLLLHCGISSLKSLSQSTPYELERKIGRLERILRVKTETSTTFTL
HHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
LKEWIKKASQIDKSIGNLG
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA