Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695928
Identifier: 126695928
GI number: 126695928
Start: 515387
End: 515998
Strand: Reverse
Name: 126695928
Synonym: P9301_05901
Alternate gene names: NA
Gene position: 515998-515387 (Counterclockwise)
Preceding gene: 126695930
Following gene: 126695927
Centisome position: 31.43
GC content: 27.12
Gene sequence:
>612_bases ATGGCAAAATGGCATGCTTTTGGAAGATGCAAAACAAGATTATCAAAAGATATAGGTAAAAGTAATTCGGCAAAAATACA AAGTGTGATAACAAAACACACTATTTCAGTCGCCAAATCTCTCCAAAAAACTAAACTAATTGATATTTCTATAGCTATAT CTGGTTTGGGGGAAAAAAATTGCAAAAGATGGTCTAAACAATTAGGTATAAAAAGATTTAATTTACAGGGGAAAGGCTGT CTGGGAGAAAAAATGAAAAGGCAAATTATTATAAACAAAAAATTTTGTACACAAAATAAGATCAAAAATATTATTTTTAT TGGTACTGACCTTCCTGATTTATGTCATCAAGATTTATTAAATACTCTAAGAAAGCTACAACATAATGATCTTATTTTAG GACCATCTAATGATGGAGGATATTGGCTTATTGGTTTATCAGAAAAAATAATGTCATCGCATCTAAACTTACCTTTTATT AACATTAAGTGGGGATCAGAAAATGTTCTTAAAAAAACAATTGATAATTTTGCGTCTATAAAATTGAAATATGAGTTTTT AGATAAAAAAATAGATATAGATACAATATTTGATATCGAGAATAGAAATTAA
Upstream 100 bases:
>100_bases AACAAACCATGATACAAACCTCTAAAAAAATTTTATTTTTTATAGGCATATAATTATTTATAATCGCAATAAATTTTTGG ATAAAGCATTACTTATTATC
Downstream 100 bases:
>100_bases TCAATTTGTTTAAAATCTCAATTATTATCCCAACTATCAATGAAGCTAATAATTTACCATTATTACTTTCAGACTTGTTG ACTACGTATAAAGAGGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MAKWHAFGRCKTRLSKDIGKSNSAKIQSVITKHTISVAKSLQKTKLIDISIAISGLGEKNCKRWSKQLGIKRFNLQGKGC LGEKMKRQIIINKKFCTQNKIKNIIFIGTDLPDLCHQDLLNTLRKLQHNDLILGPSNDGGYWLIGLSEKIMSSHLNLPFI NIKWGSENVLKKTIDNFASIKLKYEFLDKKIDIDTIFDIENRN
Sequences:
>Translated_203_residues MAKWHAFGRCKTRLSKDIGKSNSAKIQSVITKHTISVAKSLQKTKLIDISIAISGLGEKNCKRWSKQLGIKRFNLQGKGC LGEKMKRQIIINKKFCTQNKIKNIIFIGTDLPDLCHQDLLNTLRKLQHNDLILGPSNDGGYWLIGLSEKIMSSHLNLPFI NIKWGSENVLKKTIDNFASIKLKYEFLDKKIDIDTIFDIENRN >Mature_202_residues AKWHAFGRCKTRLSKDIGKSNSAKIQSVITKHTISVAKSLQKTKLIDISIAISGLGEKNCKRWSKQLGIKRFNLQGKGCL GEKMKRQIIINKKFCTQNKIKNIIFIGTDLPDLCHQDLLNTLRKLQHNDLILGPSNDGGYWLIGLSEKIMSSHLNLPFIN IKWGSENVLKKTIDNFASIKLKYEFLDKKIDIDTIFDIENRN
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23140; Mature: 23008
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKWHAFGRCKTRLSKDIGKSNSAKIQSVITKHTISVAKSLQKTKLIDISIAISGLGEKN CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHH CKRWSKQLGIKRFNLQGKGCLGEKMKRQIIINKKFCTQNKIKNIIFIGTDLPDLCHQDLL HHHHHHHCCCEEECCCCCCCHHHHHHHHHEECCHHHCHHCCCEEEEEECCCHHHHHHHHH NTLRKLQHNDLILGPSNDGGYWLIGLSEKIMSSHLNLPFINIKWGSENVLKKTIDNFASI HHHHHHCCCCEEEECCCCCCEEEEECCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHE KLKYEFLDKKIDIDTIFDIENRN EEEEEHHCCCCCCEEEEEECCCC >Mature Secondary Structure AKWHAFGRCKTRLSKDIGKSNSAKIQSVITKHTISVAKSLQKTKLIDISIAISGLGEKN CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHH CKRWSKQLGIKRFNLQGKGCLGEKMKRQIIINKKFCTQNKIKNIIFIGTDLPDLCHQDLL HHHHHHHCCCEEECCCCCCCHHHHHHHHHEECCHHHCHHCCCEEEEEECCCHHHHHHHHH NTLRKLQHNDLILGPSNDGGYWLIGLSEKIMSSHLNLPFINIKWGSENVLKKTIDNFASI HHHHHHCCCCEEEECCCCCCEEEEECCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHE KLKYEFLDKKIDIDTIFDIENRN EEEEEHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA