Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is gloB [H]
Identifier: 126695923
GI number: 126695923
Start: 510945
End: 511856
Strand: Reverse
Name: gloB [H]
Synonym: P9301_05851
Alternate gene names: 126695923
Gene position: 511856-510945 (Counterclockwise)
Preceding gene: 126695927
Following gene: 126695922
Centisome position: 31.18
GC content: 29.93
Gene sequence:
>912_bases TTGCAATTTGATTCGAAAGTTAATGATCTATTATTTTTCTCCAATGCATCAGAGAAATCTAACCCAGCTCTTTTAAAAGT TGAAATTGAATCTTTTAACAGAGCTCCTTTTGGTAAAGCTATAGTAAACATAGATCAATTTCTTCCAAGGATTCTTCATT CTAAGTTAACAATGGAATTTAATAAAGCTCAAAATATAATCGGACTAAGAGTTTTAAATGATAATGTTATTTGGTTATGG GTAAAAGATAAATCAGTTGTAGTTATAGATCCATCAGTACACGAACCAGTAATTAGATATATAGATGAAAACAATTTACA CTTAAAAGCTATTTTACAAACTCATCATCATTCAGACCATATTGGAGGGACTAAGCCTCTTATTGAAAGATGGCAAAATG TAAAGGTGATTGCTTCCTCCAAAGAAAAAAAGCGAATCCCTTTTCAAAATGTATCTGTAGAAGATGGAGAAACTTTGAAT ATTTTAGGTGAAGAAGTAAAAATAATTGAAGTATTAGGACATACAAGCTCACATATTGCCTTCTTTTTGAATGGGGAGAA CCCTGTTCTTTTTATTGGTGACACATTATTTTCTGGCGGCTGTGGCAGAATTTTTGAGGGAACTTATCAACAAATGTATT CTTCACTAGAAAGAATCAAATCTTTACCAAAAGATACTCTCATATATTGTGCACATGAATATACAAAGTCAAATATATTG TGGGCGTTGAATCTCAAGCCAAAAGATCAAGATTTAAAGAATAAACTTTCGGAAGTTGAAAAAAAACTTTCTCTTAATAA ATTGACAATTCCATTTTTACTTGATGAAGAGATGAAAATAAACCTGTTCTTAAGAGCAAAAAATTTAGAAGAATTTACTT TTTTAAGAGCAAATAAAGATTTATGGGTTTAA
Upstream 100 bases:
>100_bases TTCTCGTAAAACGTCATACCCAACAATACCCAAATCAGCTTGGCCATAACTTACATAAACAGGAACATCTCCATTCCTTA CCAATAAAGCTTTAGCCCGT
Downstream 100 bases:
>100_bases ATTGATAGGTATCTTCTTAAACAAATGGCTCCCAAACAAGTAATTAAAACATCAAATGCTCCAGATCCAGTAGGACCTTA TAATCAAGCAATAAAAGCTG
Product: putative hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MQFDSKVNDLLFFSNASEKSNPALLKVEIESFNRAPFGKAIVNIDQFLPRILHSKLTMEFNKAQNIIGLRVLNDNVIWLW VKDKSVVVIDPSVHEPVIRYIDENNLHLKAILQTHHHSDHIGGTKPLIERWQNVKVIASSKEKKRIPFQNVSVEDGETLN ILGEEVKIIEVLGHTSSHIAFFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKDTLIYCAHEYTKSNIL WALNLKPKDQDLKNKLSEVEKKLSLNKLTIPFLLDEEMKINLFLRAKNLEEFTFLRANKDLWV
Sequences:
>Translated_303_residues MQFDSKVNDLLFFSNASEKSNPALLKVEIESFNRAPFGKAIVNIDQFLPRILHSKLTMEFNKAQNIIGLRVLNDNVIWLW VKDKSVVVIDPSVHEPVIRYIDENNLHLKAILQTHHHSDHIGGTKPLIERWQNVKVIASSKEKKRIPFQNVSVEDGETLN ILGEEVKIIEVLGHTSSHIAFFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKDTLIYCAHEYTKSNIL WALNLKPKDQDLKNKLSEVEKKLSLNKLTIPFLLDEEMKINLFLRAKNLEEFTFLRANKDLWV >Mature_303_residues MQFDSKVNDLLFFSNASEKSNPALLKVEIESFNRAPFGKAIVNIDQFLPRILHSKLTMEFNKAQNIIGLRVLNDNVIWLW VKDKSVVVIDPSVHEPVIRYIDENNLHLKAILQTHHHSDHIGGTKPLIERWQNVKVIASSKEKKRIPFQNVSVEDGETLN ILGEEVKIIEVLGHTSSHIAFFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKDTLIYCAHEYTKSNIL WALNLKPKDQDLKNKLSEVEKKLSLNKLTIPFLLDEEMKINLFLRAKNLEEFTFLRANKDLWV
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=226, Percent_Identity=34.070796460177, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI94538322, Length=226, Percent_Identity=34.070796460177, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI116642887, Length=243, Percent_Identity=32.5102880658436, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI21703352, Length=243, Percent_Identity=32.5102880658436, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI14150041, Length=221, Percent_Identity=33.0316742081448, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI46361987, Length=198, Percent_Identity=31.8181818181818, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI1786406, Length=253, Percent_Identity=39.5256916996047, Blast_Score=177, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17536925, Length=230, Percent_Identity=32.6086956521739, Blast_Score=134, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17538952, Length=209, Percent_Identity=30.1435406698565, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320478, Length=221, Percent_Identity=29.4117647058824, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324614, Length=219, Percent_Identity=30.5936073059361, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI21356335, Length=244, Percent_Identity=34.4262295081967, Blast_Score=144, Evalue=6e-35, Organism=Drosophila melanogaster, GI24667703, Length=244, Percent_Identity=34.4262295081967, Blast_Score=144, Evalue=6e-35, Organism=Drosophila melanogaster, GI24667711, Length=225, Percent_Identity=35.1111111111111, Blast_Score=142, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 34823; Mature: 34823
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDSKVNDLLFFSNASEKSNPALLKVEIESFNRAPFGKAIVNIDQFLPRILHSKLTMEF CCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEE NKAQNIIGLRVLNDNVIWLWVKDKSVVVIDPSVHEPVIRYIDENNLHLKAILQTHHHSDH CCCCCEEEEEEECCCEEEEEEECCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCCCCC IGGTKPLIERWQNVKVIASSKEKKRIPFQNVSVEDGETLNILGEEVKIIEVLGHTSSHIA CCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEE FFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKDTLIYCAHEYTKSNIL EEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEE WALNLKPKDQDLKNKLSEVEKKLSLNKLTIPFLLDEEMKINLFLRAKNLEEFTFLRANKD EEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEEECCCCCEEEEECCCC LWV CCC >Mature Secondary Structure MQFDSKVNDLLFFSNASEKSNPALLKVEIESFNRAPFGKAIVNIDQFLPRILHSKLTMEF CCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEE NKAQNIIGLRVLNDNVIWLWVKDKSVVVIDPSVHEPVIRYIDENNLHLKAILQTHHHSDH CCCCCEEEEEEECCCEEEEEEECCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCCCCC IGGTKPLIERWQNVKVIASSKEKKRIPFQNVSVEDGETLNILGEEVKIIEVLGHTSSHIA CCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEE FFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKDTLIYCAHEYTKSNIL EEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEE WALNLKPKDQDLKNKLSEVEKKLSLNKLTIPFLLDEEMKINLFLRAKNLEEFTFLRANKD EEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEEECCCCCEEEEECCCC LWV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA