Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is chlN
Identifier: 126695909
GI number: 126695909
Start: 499633
End: 500889
Strand: Reverse
Name: chlN
Synonym: P9301_05711
Alternate gene names: 126695909
Gene position: 500889-499633 (Counterclockwise)
Preceding gene: 126695910
Following gene: 126695908
Centisome position: 30.51
GC content: 35.96
Gene sequence:
>1257_bases ATGAGTAAAGTTGAATTTAAGAAGGAAACGGGGCCTAGGGAAGTTTTTTGTGGGTTAACTTCAATAGTTTGGCTCCACAG AAGAATGCCGGATGCATTTTTTCTCGTTGTAGGCTCAAGGACGTGTGCTCATTTAATTCAAAGTGCTGCTGGAGTTATGA TTTTTGCTGAGCCAAGATTTGGGACGGCTATTCTTGAAGAAAAAGATCTTGCTGGTCTTGCTGACGCTCATGAAGAATTA GATCGAGTGGTAAATGATCTTATTGAGAGAAGACCAGAAATAAAAACTCTTTTTCTAGTTGGATCTTGTCCAAGTGAGGT AATCAAATTAGATCTTGCCACTGTCGCAGAGAAATTAAATAAAAGATTTTTAGGTCAAGTGAGATTCGTTAATTACTCTG GCAGTGGGATAGAAACAACTTTTACCCAAGGAGAGGATGGCGCCTTAAAAGCTTTAATACCATTAATGGAGTCATCAAAT GAGGAGAAATTATTATTAGTTGGGACTCTTGCAAATAATGTAGAGGATAGGTTTAAAAAGATTTTTAGAAATTTAGGAAT TTCAAATATTGAAAGCTTCCCACCTCGTCAATCAACAGAATTACCAAAGATTGGCAAAAATACAAAAGTTTTATTAACTC AGCCTTATTTAAGTGATACCGTTCGAGATCTAAAACATCGTGGTTGTGATATAATTTCGGCTCCATTTCCTCTTGGTATC GAAGGAAGTACTCAATGGTTTTTAGCTGCAGCGAAAGCTTTCAAAATTGGTGAACTTAAAGTTCATGAAATTATTTCGCC TTTAATAAAAAGAGCAAAACTTGCTCTGGAATCTCACAAAGAAATACTTAAAGGGAAAAGATTGTTTCTTCTTCCTGAAT CGCAACTAGAGATATCTTTAGCAAGATTTTTGCATAATGAATGCGAAATGGATCTCATAGAGGTAGGCACCCCTTACCTA AATAAGGATTTAATGAAAGAAGAGATTAATTTATTACCTGATAATACAAAAATTGTTGAAGGGCAACATGTAGAAAAACA ATTAGATCGGGTGAGAAATTCTAATCCAGACTTAGTAGTTTGTGGAATGGGTCTAGCTAACCCTCTTGAGGCGGAGGGGA TTAGTACTAAGTGGTCAATAGAAATGGTATTCAGTCCAATTCACGGAATTGATCAAGCCGCAGATTTGGCTGGTCTCTTT TCCAAACCTTTAAAAAGGAATCAAATACTAACTTCAAAAACTTTAGTAACGCATTAA
Upstream 100 bases:
>100_bases AGTTTTTTAAATGTGTTCGTTTTGTAAGAGAACTTATTAATTACTTTCTTAAATTAAAAAGTTTATGCAAGCTTGAAATA TAAGCTCTCGAAAATTTTTA
Downstream 100 bases:
>100_bases AAAACTATGGAATTAACTCTATGGACATATGAAGGACCGCCACATGTTGGTGCTATGAGAATTGCATCGTCAATGAAAGA TATACATTATGTGCTTCATG
Product: light-independent protochlorophyllide reductase subunit N
Products: NA
Alternate protein names: DPOR subunit N; LI-POR subunit N
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSKVEFKKETGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILEEKDLAGLADAHEEL DRVVNDLIERRPEIKTLFLVGSCPSEVIKLDLATVAEKLNKRFLGQVRFVNYSGSGIETTFTQGEDGALKALIPLMESSN EEKLLLVGTLANNVEDRFKKIFRNLGISNIESFPPRQSTELPKIGKNTKVLLTQPYLSDTVRDLKHRGCDIISAPFPLGI EGSTQWFLAAAKAFKIGELKVHEIISPLIKRAKLALESHKEILKGKRLFLLPESQLEISLARFLHNECEMDLIEVGTPYL NKDLMKEEINLLPDNTKIVEGQHVEKQLDRVRNSNPDLVVCGMGLANPLEAEGISTKWSIEMVFSPIHGIDQAADLAGLF SKPLKRNQILTSKTLVTH
Sequences:
>Translated_418_residues MSKVEFKKETGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILEEKDLAGLADAHEEL DRVVNDLIERRPEIKTLFLVGSCPSEVIKLDLATVAEKLNKRFLGQVRFVNYSGSGIETTFTQGEDGALKALIPLMESSN EEKLLLVGTLANNVEDRFKKIFRNLGISNIESFPPRQSTELPKIGKNTKVLLTQPYLSDTVRDLKHRGCDIISAPFPLGI EGSTQWFLAAAKAFKIGELKVHEIISPLIKRAKLALESHKEILKGKRLFLLPESQLEISLARFLHNECEMDLIEVGTPYL NKDLMKEEINLLPDNTKIVEGQHVEKQLDRVRNSNPDLVVCGMGLANPLEAEGISTKWSIEMVFSPIHGIDQAADLAGLF SKPLKRNQILTSKTLVTH >Mature_417_residues SKVEFKKETGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILEEKDLAGLADAHEELD RVVNDLIERRPEIKTLFLVGSCPSEVIKLDLATVAEKLNKRFLGQVRFVNYSGSGIETTFTQGEDGALKALIPLMESSNE EKLLLVGTLANNVEDRFKKIFRNLGISNIESFPPRQSTELPKIGKNTKVLLTQPYLSDTVRDLKHRGCDIISAPFPLGIE GSTQWFLAAAKAFKIGELKVHEIISPLIKRAKLALESHKEILKGKRLFLLPESQLEISLARFLHNECEMDLIEVGTPYLN KDLMKEEINLLPDNTKIVEGQHVEKQLDRVRNSNPDLVVCGMGLANPLEAEGISTKWSIEMVFSPIHGIDQAADLAGLFS KPLKRNQILTSKTLVTH
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BchN/ChlN family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHLN_PROM0 (A3PBR9)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001090795.1 - STRING: A3PBR9 - GeneID: 4911792 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_05711 - eggNOG: COG2710 - HOGENOM: HBG361243 - OMA: MIFAEPR - ProtClustDB: PRK02842 - BioCyc: PMAR167546:P9301ORF_0585-MONOMER - HAMAP: MF_00352 - InterPro: IPR000510 - InterPro: IPR005970 - PIRSF: PIRSF000162 - TIGRFAMs: TIGR01279
Pfam domain/function: PF00148 Oxidored_nitro
EC number: 1.18.-.-
Molecular weight: Translated: 46615; Mature: 46484
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVEFKKETGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRF CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCC GTAILEEKDLAGLADAHEELDRVVNDLIERRPEIKTLFLVGSCPSEVIKLDLATVAEKLN CCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH KRFLGQVRFVNYSGSGIETTFTQGEDGALKALIPLMESSNEEKLLLVGTLANNVEDRFKK HHHHCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHH IFRNLGISNIESFPPRQSTELPKIGKNTKVLLTQPYLSDTVRDLKHRGCDIISAPFPLGI HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEECCCCCCC EGSTQWFLAAAKAFKIGELKVHEIISPLIKRAKLALESHKEILKGKRLFLLPESQLEISL CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH ARFLHNECEMDLIEVGTPYLNKDLMKEEINLLPDNTKIVEGQHVEKQLDRVRNSNPDLVV HHHHHHHCCCCHHHCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCEEE CGMGLANPLEAEGISTKWSIEMVFSPIHGIDQAADLAGLFSKPLKRNQILTSKTLVTH ECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCEEECHHHCCC >Mature Secondary Structure SKVEFKKETGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRF CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCC GTAILEEKDLAGLADAHEELDRVVNDLIERRPEIKTLFLVGSCPSEVIKLDLATVAEKLN CCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH KRFLGQVRFVNYSGSGIETTFTQGEDGALKALIPLMESSNEEKLLLVGTLANNVEDRFKK HHHHCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHH IFRNLGISNIESFPPRQSTELPKIGKNTKVLLTQPYLSDTVRDLKHRGCDIISAPFPLGI HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEECCCCCCC EGSTQWFLAAAKAFKIGELKVHEIISPLIKRAKLALESHKEILKGKRLFLLPESQLEISL CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH ARFLHNECEMDLIEVGTPYLNKDLMKEEINLLPDNTKIVEGQHVEKQLDRVRNSNPDLVV HHHHHHHCCCCHHHCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCEEE CGMGLANPLEAEGISTKWSIEMVFSPIHGIDQAADLAGLFSKPLKRNQILTSKTLVTH ECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA