Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695893
Identifier: 126695893
GI number: 126695893
Start: 485022
End: 485927
Strand: Reverse
Name: 126695893
Synonym: P9301_05551
Alternate gene names: NA
Gene position: 485927-485022 (Counterclockwise)
Preceding gene: 126695894
Following gene: 126695892
Centisome position: 29.6
GC content: 32.45
Gene sequence:
>906_bases ATGAACATTAAAAAAAAAATGGAGTCAGGTCTTAAATCAAAAATTTCAGATTGGGAATTAGACTTTTACTCAAGGCCGAT TATTGAATCAAATGGAAAAAAAAGGTGGGAATTAATTATTTGCTCTACAAGAAGTTATAAGACAGAAGATGTTTTTCTTT GGAATAAAAAATGCCCTGCCAATGAAGTTAATTCAGTGTGGCTTACAAGGGCGCTAAATGAAGCAATAAGTGAAGCAAAA AAACAAGGGTGGGAGAAGCCTTCTATAGTTCGATTCTGGAGGTCGTCAATGAAATCGATCATTAAGAAATCTCTAGATGC CGTAAGTATTGAGGCTATTGTAAGTAGAAGAACTTACAATTTATTAGATAGAATCGAATTTCTTGAAAAAGAGATTTATC CAAAGGAAAAAGGTTATGTAAGAGGTGTATTAGCTCCCACTTTTACTTCTAAAATGGAAAACCCTCCCACACCTTTACCA GAAGCAGTAAGGGGTGATGCTTTGACTATCTCTGAAATATCCATTGGTGAATTAAAATCAGCACAAAATTGGCCTATGGA ATTTGGAGATATTTTCCCAATTCAGCAAGACATAGATGATAATTACTTAATTCCAGGATTAAGACTTTTTAGCAAAGATA GATCTTTGGCACTTTCTGCATGGTTTAGTTGTTTAGAACCTATTAAATTAGTCGTAAATAAGAACCAACTCATACTTGAA GCTTCAGAAGATGATAAGTGGCTTGTAACTGATTTACCAGAAAAAGATGCAAACATTTTAAATACAAAGTTTTTAGAGAA TAAAAAAAATTCTTTTGGTTATCAATTTATTTCCATACAGTCAACGCCGTTTATCGAAAAATTTGCAGGATTCTGGATCT TAAGAGATATTGAATTAATTTCATAA
Upstream 100 bases:
>100_bases CTGCGGGAGAATTAATTATTGATAAGCAAAAAGTTATGCAAGAAGCCACAGAGAGAGCACTAAAAACTAAAGCACTCTTC GATAAAAAAGAACAAGATAA
Downstream 100 bases:
>100_bases ATTCAGCTTAGGAGCGGGAACAATTCCTTACAAAGAAATATATTTCTCAAAAGATGAAATTTATATTCAAAACAAAAAAT TTGAGTATTATTCATCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNIKKKMESGLKSKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPANEVNSVWLTRALNEAISEAK KQGWEKPSIVRFWRSSMKSIIKKSLDAVSIEAIVSRRTYNLLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLP EAVRGDALTISEISIGELKSAQNWPMEFGDIFPIQQDIDDNYLIPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE ASEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPFIEKFAGFWILRDIELIS
Sequences:
>Translated_301_residues MNIKKKMESGLKSKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPANEVNSVWLTRALNEAISEAK KQGWEKPSIVRFWRSSMKSIIKKSLDAVSIEAIVSRRTYNLLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLP EAVRGDALTISEISIGELKSAQNWPMEFGDIFPIQQDIDDNYLIPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE ASEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPFIEKFAGFWILRDIELIS >Mature_301_residues MNIKKKMESGLKSKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPANEVNSVWLTRALNEAISEAK KQGWEKPSIVRFWRSSMKSIIKKSLDAVSIEAIVSRRTYNLLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLP EAVRGDALTISEISIGELKSAQNWPMEFGDIFPIQQDIDDNYLIPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE ASEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPFIEKFAGFWILRDIELIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34802; Mature: 34802
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKKKMESGLKSKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPA CCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCC NEVNSVWLTRALNEAISEAKKQGWEKPSIVRFWRSSMKSIIKKSLDAVSIEAIVSRRTYN CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLPEAVRGDALTISEISIGELKS HHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCCCCCHHHCCCCEEEECCCHHHHCC AQNWPMEFGDIFPIQQDIDDNYLIPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE CCCCCCCCCCCCCCHHCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEE ASEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPFIEKFAGFWILRDIELI ECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCEEEEEEEC S C >Mature Secondary Structure MNIKKKMESGLKSKISDWELDFYSRPIIESNGKKRWELIICSTRSYKTEDVFLWNKKCPA CCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCC NEVNSVWLTRALNEAISEAKKQGWEKPSIVRFWRSSMKSIIKKSLDAVSIEAIVSRRTYN CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDRIEFLEKEIYPKEKGYVRGVLAPTFTSKMENPPTPLPEAVRGDALTISEISIGELKS HHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCCCCCHHHCCCCEEEECCCHHHHCC AQNWPMEFGDIFPIQQDIDDNYLIPGLRLFSKDRSLALSAWFSCLEPIKLVVNKNQLILE CCCCCCCCCCCCCCHHCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEE ASEDDKWLVTDLPEKDANILNTKFLENKKNSFGYQFISIQSTPFIEKFAGFWILRDIELI ECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCEEEEEEEC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA