Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126695496

Identifier: 126695496

GI number: 126695496

Start: 147657

End: 148310

Strand: Reverse

Name: 126695496

Synonym: P9301_01581

Alternate gene names: NA

Gene position: 148310-147657 (Counterclockwise)

Preceding gene: 126695497

Following gene: 126695490

Centisome position: 9.03

GC content: 26.91

Gene sequence:

>654_bases
ATGACAAATAAACTAAAACAAAGAGAAAATTACCCTATACTAGTGATCTACAGCACAGACAATTCTTTTGGCTTTGGTTA
TAGAAAAAACAATAACTCTGAATCTGATCAATTATTCATCAAAAAATTTGATAACGACCTTTGCAACAATTTAATAAATG
ACCTTATCAAATTCATTTCCAAAGAAAATTTACAAAAAGTAAATAAGTTATCTGTTAGTGTAGGGCCTGCAAATTTTAAT
GCCTCACGACTTATTGTAGTTTTAGCAAGAACTATCTCACAACAAATAAATTGTCCTCTAGACAGTTTTAGTTCATTTGA
AATAATGGCAAAAAGAATTGCATCAAAAAATAATATCTTCATAAACAAAAAATCATTCTGGATTTACAAAAAATTAAAAC
GAAAGGGTATTATTGCTGGTAAATATGAAATTTGTCATAACGAAAAAAATACCTCTGATCTAGTCATTCGAGAAACAGTT
TTACCAAAAGTTATAAAAGAACTTGATAGCAAAGAACTTTTTTTTGAAGCTATTTATGATGCTAAAGAAGATTTAAAAGA
ACTATTAGATTTGTCTAATAAAAATTTATTAAATTCAAATGTAGATTCCTGGAAAACAGTTTTGCCTCTTTACCCTATTT
CTCCAATTAACTAA

Upstream 100 bases:

>100_bases
AACTGATTGGGATGTCCAATCTTGTGAAAGTTTTAAAAATGAATTTGGGAAATGGTCTAAATGTAACCCTGGCATGGAAT
TACCTGTTTAAAGGTAATAG

Downstream 100 bases:

>100_bases
ATATTCATCCAATCAAATAATTAATTTCATCTTGAAGGCGCTTTGTTAAAGAATTTAGATCATCTCTTGATGAACTTTGT
GGAGGTTGAAAAGGTTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTNKLKQRENYPILVIYSTDNSFGFGYRKNNNSESDQLFIKKFDNDLCNNLINDLIKFISKENLQKVNKLSVSVGPANFN
ASRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNIFINKKSFWIYKKLKRKGIIAGKYEICHNEKNTSDLVIRETV
LPKVIKELDSKELFFEAIYDAKEDLKELLDLSNKNLLNSNVDSWKTVLPLYPISPIN

Sequences:

>Translated_217_residues
MTNKLKQRENYPILVIYSTDNSFGFGYRKNNNSESDQLFIKKFDNDLCNNLINDLIKFISKENLQKVNKLSVSVGPANFN
ASRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNIFINKKSFWIYKKLKRKGIIAGKYEICHNEKNTSDLVIRETV
LPKVIKELDSKELFFEAIYDAKEDLKELLDLSNKNLLNSNVDSWKTVLPLYPISPIN
>Mature_216_residues
TNKLKQRENYPILVIYSTDNSFGFGYRKNNNSESDQLFIKKFDNDLCNNLINDLIKFISKENLQKVNKLSVSVGPANFNA
SRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNIFINKKSFWIYKKLKRKGIIAGKYEICHNEKNTSDLVIRETVL
PKVIKELDSKELFFEAIYDAKEDLKELLDLSNKNLLNSNVDSWKTVLPLYPISPIN

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25035; Mature: 24904

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKLKQRENYPILVIYSTDNSFGFGYRKNNNSESDQLFIKKFDNDLCNNLINDLIKFIS
CCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KENLQKVNKLSVSVGPANFNASRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNIF
HHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE
INKKSFWIYKKLKRKGIIAGKYEICHNEKNTSDLVIRETVLPKVIKELDSKELFFEAIYD
EECCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AKEDLKELLDLSNKNLLNSNVDSWKTVLPLYPISPIN
HHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TNKLKQRENYPILVIYSTDNSFGFGYRKNNNSESDQLFIKKFDNDLCNNLINDLIKFIS
CCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KENLQKVNKLSVSVGPANFNASRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNIF
HHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE
INKKSFWIYKKLKRKGIIAGKYEICHNEKNTSDLVIRETVLPKVIKELDSKELFFEAIYD
EECCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AKEDLKELLDLSNKNLLNSNVDSWKTVLPLYPISPIN
HHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA