| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is yueD [H]
Identifier: 126447799
GI number: 126447799
Start: 2150156
End: 2150896
Strand: Direct
Name: yueD [H]
Synonym: BMA10247_A2209
Alternate gene names: 126447799
Gene position: 2150156-2150896 (Clockwise)
Preceding gene: 126447047
Following gene: 126447610
Centisome position: 91.39
GC content: 71.79
Gene sequence:
>741_bases TTGCCCGCCGTTCGCGCGATCGTCACCGGTCACACGCGCGGGCTCGGCGAGGCGCTTGCCGAGCAGTTGCTGCGGCGGGA CATCGCCGTGCTCGGTCTGTCGCGCGGCCGCCATCCGTCGCTCGCCTCGCACGCGCCAGAGCGCCTCGTCGAGGCCGAGC TGGATCTGTCGGAGCCGGCGCGCGTTCAAGCGTGGCTCGGCGGCGACACGCTCGGCGCATTCGTCGCCGGCGCGAGCCGC GTGCTGCTGTTCAACAACGCGGGCACCGTCGAGCCGATCGGCCCGCTCGATACGCAGGACACGGCGGCGATCGCACGCGC GGTCGGCCTGAACGTCGCGACGCCGCTGATGCTCGCGAGCGCGCTCGCGAAGCTCGCGCCGGATGCGCTCGAGCGCCGCA TCGCGCACATCTCGAGCGGCGCGGCGCGCAACGCGTATGCGGGCTGGAGCGTCTATTGCGCGACCAAGGCCGCGCTCGAT CACCACGCTCGGGCGGTCGCGCTGGATGCGAACCGCGCGCTGCGGATCTGCAGCGTCGCGCCCGGCGTCGTGGATACCGG CATGCAGGCGACGATCCGCGCGACGAGCGACGAGCGGCTTCCCTCGCGCGAGCGGTTCGCGCAACTGAAGTCGAGCGGCG CGCTGTCGACGCCCGACGATGCCGCGCGTCAATTGATCGATTATGTGCTGAGCGACGATTTCGGCTCGACGCCGACCGCC GACATTCGCCATCTGGGGTGA
Upstream 100 bases:
>100_bases CGTGAATCGGCCGCCGGGCTTCGCCGGATGCCGCGCCGCGCGCGTCACGCATCCCGTTTCCATCACTTTGCGCATCGACA TGACCACTTCCCCTTCTCCA
Downstream 100 bases:
>100_bases GCCGCGGCGCGCGGCGACGAAGCGCCGGCGTCGAACCGCGCGCGCTCGAACGGATTCGGCGACGGCGCGCCCGACAGTCG CGAGGCGCGCGCCGCGCGAT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGAFVAGASR VLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALD HHARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTA DIRHLG
Sequences:
>Translated_246_residues MPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGAFVAGASR VLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALD HHARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTA DIRHLG >Mature_245_residues PAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGAFVAGASRV LLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALDH HARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTAD IRHLG
Specific function: Reduces benzil stereospecifically to (S)-benzoin. Can also reduces 1-phenyl-1,2-propanedione, 1,4-naphthoquinone, 1-(4- methyl-phenyl)-2-phenyl-ethane-1,2-dione, 1-(4-fluoro-phenyl)-2- phenyl-ethane-1,2-dione, methyl benzoylformate, p- nitrobenzaldehyde i
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4507185, Length=200, Percent_Identity=33.5, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6322227, Length=244, Percent_Identity=29.0983606557377, Blast_Score=79, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6322226, Length=210, Percent_Identity=29.5238095238095, Blast_Score=79, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25778; Mature: 25646
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPA CCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC RVQAWLGGDTLGAFVAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLAS EEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH ALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALDHHARAVALDANRALRICSVA HHHHHCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCCEEEECCC PGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTA CCHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC DIRHLG HHCCCC >Mature Secondary Structure PAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPA CCHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC RVQAWLGGDTLGAFVAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLAS EEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH ALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALDHHARAVALDANRALRICSVA HHHHHCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCCEEEECCC PGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTA CCHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC DIRHLG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11745140; 11796169 [H]