Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is yueD [H]

Identifier: 126447799

GI number: 126447799

Start: 2150156

End: 2150896

Strand: Direct

Name: yueD [H]

Synonym: BMA10247_A2209

Alternate gene names: 126447799

Gene position: 2150156-2150896 (Clockwise)

Preceding gene: 126447047

Following gene: 126447610

Centisome position: 91.39

GC content: 71.79

Gene sequence:

>741_bases
TTGCCCGCCGTTCGCGCGATCGTCACCGGTCACACGCGCGGGCTCGGCGAGGCGCTTGCCGAGCAGTTGCTGCGGCGGGA
CATCGCCGTGCTCGGTCTGTCGCGCGGCCGCCATCCGTCGCTCGCCTCGCACGCGCCAGAGCGCCTCGTCGAGGCCGAGC
TGGATCTGTCGGAGCCGGCGCGCGTTCAAGCGTGGCTCGGCGGCGACACGCTCGGCGCATTCGTCGCCGGCGCGAGCCGC
GTGCTGCTGTTCAACAACGCGGGCACCGTCGAGCCGATCGGCCCGCTCGATACGCAGGACACGGCGGCGATCGCACGCGC
GGTCGGCCTGAACGTCGCGACGCCGCTGATGCTCGCGAGCGCGCTCGCGAAGCTCGCGCCGGATGCGCTCGAGCGCCGCA
TCGCGCACATCTCGAGCGGCGCGGCGCGCAACGCGTATGCGGGCTGGAGCGTCTATTGCGCGACCAAGGCCGCGCTCGAT
CACCACGCTCGGGCGGTCGCGCTGGATGCGAACCGCGCGCTGCGGATCTGCAGCGTCGCGCCCGGCGTCGTGGATACCGG
CATGCAGGCGACGATCCGCGCGACGAGCGACGAGCGGCTTCCCTCGCGCGAGCGGTTCGCGCAACTGAAGTCGAGCGGCG
CGCTGTCGACGCCCGACGATGCCGCGCGTCAATTGATCGATTATGTGCTGAGCGACGATTTCGGCTCGACGCCGACCGCC
GACATTCGCCATCTGGGGTGA

Upstream 100 bases:

>100_bases
CGTGAATCGGCCGCCGGGCTTCGCCGGATGCCGCGCCGCGCGCGTCACGCATCCCGTTTCCATCACTTTGCGCATCGACA
TGACCACTTCCCCTTCTCCA

Downstream 100 bases:

>100_bases
GCCGCGGCGCGCGGCGACGAAGCGCCGGCGTCGAACCGCGCGCGCTCGAACGGATTCGGCGACGGCGCGCCCGACAGTCG
CGAGGCGCGCGCCGCGCGAT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGAFVAGASR
VLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALD
HHARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTA
DIRHLG

Sequences:

>Translated_246_residues
MPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGAFVAGASR
VLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALD
HHARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTA
DIRHLG
>Mature_245_residues
PAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGAFVAGASRV
LLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALDH
HARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTAD
IRHLG

Specific function: Reduces benzil stereospecifically to (S)-benzoin. Can also reduces 1-phenyl-1,2-propanedione, 1,4-naphthoquinone, 1-(4- methyl-phenyl)-2-phenyl-ethane-1,2-dione, 1-(4-fluoro-phenyl)-2- phenyl-ethane-1,2-dione, methyl benzoylformate, p- nitrobenzaldehyde i

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4507185, Length=200, Percent_Identity=33.5, Blast_Score=91, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322227, Length=244, Percent_Identity=29.0983606557377, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6322226, Length=210, Percent_Identity=29.5238095238095, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25778; Mature: 25646

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPA
CCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
RVQAWLGGDTLGAFVAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLAS
EEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
ALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALDHHARAVALDANRALRICSVA
HHHHHCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCCEEEECCC
PGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTA
CCHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
DIRHLG
HHCCCC
>Mature Secondary Structure 
PAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPA
CCHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
RVQAWLGGDTLGAFVAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLAS
EEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
ALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALDHHARAVALDANRALRICSVA
HHHHHCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCCEEEECCC
PGVVDTGMQATIRATSDERLPSRERFAQLKSSGALSTPDDAARQLIDYVLSDDFGSTPTA
CCHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
DIRHLG
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11745140; 11796169 [H]