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The map label for this gene is yqhC [C]

Identifier: 126447763

GI number: 126447763

Start: 838096

End: 838968

Strand: Direct

Name: yqhC [C]

Synonym: BMA10247_A0885

Alternate gene names: 126447763

Gene position: 838096-838968 (Clockwise)

Preceding gene: 126446947

Following gene: 126446737

Centisome position: 35.62

GC content: 68.96

Gene sequence:

>873_bases
ATGATGACTTTGCTTGCCGTGCCGCCCGAGAAGTTGTCCGCCGCATCGGCCGCCTCCACGGCCGCCGGCCCGACGCCGGC
GGCCGGGAACGGCGCGTGTGCTTCGCCGCCGTCGTCGGGCGCCGCACTCGAAGGCGACGACGACGGCTTCGCCGCGATGC
TCGCGCACTTCGCGCAATTGGAGCCGGTGTTCGACGCGCTGCCCGACGTCGCGTTCTTCGTGAAGGACGTGCGCGCGCGC
TACGCGCTCGTGAACCGCACGCTCGCGCAGCGCTGCGGCTACAAGGACAAGCGCGACCTGTACGGCAAGGCCGCGGACGA
AGTCTTTCCGCGCCGCTTCGGGCGCAGCTACGTCGAGCAGGATCTGACGATCATCGCGGGCGGCCGGCAACTGACCGATC
AACTGGAGCTGCATCTGTACTCGGGCCGCCAGCCCGGCTGGTGCCTGACGTGCAAGGAGCCGCTGCGCAACGCGCAGGGG
AGGATCGTCGGGATCGCGGGGCTTTCGCGCGACCTGCGCGCGCACGAGAGCTCGCATCCGGCGTACAGCCGCATCGCGGA
CGTCGTGCGCTACATCCACGCGCATTACGTGCAGCCGCTGAACCTGAAGCATCTCGCCGGGATGGCGGGCATGTCGGTTG
CGCAGCTCGAGCGCTATTTTCACAAGGTGTTTCATCTGACGCCGCGGCAGATGCTGCTGAAGGCGCGGCTCGACGCGGCC
ACCGCGCTGCTCGTCACCCACGACAAGGTGACGGACGTCGCCGCGCTGTGCGGCTACACCGATCACAGCGCGTTCACGCG
GCAGTTCAAGGCGACGGTCGGCGTGACGCCGACCGAGTATCGGCTGATGCTGCAGGAGGGGCGGGGGGCTTGA

Upstream 100 bases:

>100_bases
GCCCGCCGTTCTCGCCCGCGCGCATCGACACGCTGCTCGCCGCGTCCGACGACGCGCTCCTATAATCGACGCCAACCGTG
TGACGACGCGCGAGACCCGT

Downstream 100 bases:

>100_bases
CGCGCAGGCGCCGCGCCGGCCGCCGGGCGTGCCCGCGCGGAGCGGACGGCCGACGATCCGGGGGCCCGGGCGCGTGGCTC
GGCGCCGAGCGCGCAAAAGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator With PAS/PAC Sensors AraC Family; Transcription Regulator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator AraC; PAS Fold-4 Domain Protein; PAS Sensor Protein; AraC Family Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Proline Utilization Regulator; AraC Family Transcription Regulator; Regulatory Protein; Transcriptional Regulator Protein AraC Family; Transcriptional Regulator Transcription Regulator Protein; PAS Fold Family Protein

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MMTLLAVPPEKLSAASAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAHFAQLEPVFDALPDVAFFVKDVRAR
YALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRSYVEQDLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLRNAQG
RIVGIAGLSRDLRAHESSHPAYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKARLDAA
TALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA

Sequences:

>Translated_290_residues
MMTLLAVPPEKLSAASAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAHFAQLEPVFDALPDVAFFVKDVRAR
YALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRSYVEQDLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLRNAQG
RIVGIAGLSRDLRAHESSHPAYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKARLDAA
TALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA
>Mature_290_residues
MMTLLAVPPEKLSAASAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAHFAQLEPVFDALPDVAFFVKDVRAR
YALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRSYVEQDLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLRNAQG
RIVGIAGLSRDLRAHESSHPAYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKARLDAA
TALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31566; Mature: 31566

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLLAVPPEKLSAASAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAHFAQL
CCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EPVFDALPDVAFFVKDVRARYALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRSYVEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLRNAQGRIVGIAGLSRDLRAHESSHP
CCEEEECCHHHHHHHHHHEECCCCCCEEEECHHHHCCCCCCEEEECCCCHHHHHHCCCCC
AYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKARLDAA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA
HEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMTLLAVPPEKLSAASAASTAAGPTPAAGNGACASPPSSGAALEGDDDGFAAMLAHFAQL
CCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EPVFDALPDVAFFVKDVRARYALVNRTLAQRCGYKDKRDLYGKAADEVFPRRFGRSYVEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DLTIIAGGRQLTDQLELHLYSGRQPGWCLTCKEPLRNAQGRIVGIAGLSRDLRAHESSHP
CCEEEECCHHHHHHHHHHEECCCCCCEEEECHHHHCCCCCCEEEECCCCHHHHHHCCCCC
AYSRIADVVRYIHAHYVQPLNLKHLAGMAGMSVAQLERYFHKVFHLTPRQMLLKARLDAA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TALLVTHDKVTDVAALCGYTDHSAFTRQFKATVGVTPTEYRLMLQEGRGA
HEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA