Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447752
Identifier: 126447752
GI number: 126447752
Start: 1888162
End: 1888284
Strand: Reverse
Name: 126447752
Synonym: BMA10247_A1964
Alternate gene names: NA
Gene position: 1888284-1888162 (Counterclockwise)
Preceding gene: 126447171
Following gene: 126447627
Centisome position: 80.26
GC content: 58.54
Gene sequence:
>123_bases ATGACGGCCGACGTCGGCATCGGCCGGGTTCGTCGCATCGTGACCATTCGGCGTCGTTTGGTGACGGGTAGCGCGAAAAA TGGGTTTGTATTTTTCGCCAACGGCATCCGATTGTGCGCGTGA
Upstream 100 bases:
>100_bases TGCGTGCGAACCCGTCGCTCGTCGAAGCATGGCTCGACGGCGTGCGCACCGCGAGCGGCGCGCCAGGCTTGCCTGCGGTG CGCGCGGCGCTCGATGCGCA
Downstream 100 bases:
>100_bases TGCGCAACGGTCGTCGGAGTGGTGCGTCGTTTCAGCAATAGTCGCGGATTCGCGTGCGTAACGCGGGAATCTACTTTCTT ATCGAATGAGCAGGGTGGGG
Product: outer membrane porin OpcP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MTADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA
Sequences:
>Translated_40_residues MTADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA >Mature_39_residues TADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4393; Mature: 4262
Theoretical pI: Translated: 12.63; Mature: 12.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECC >Mature Secondary Structure TADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA