Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 126447752

Identifier: 126447752

GI number: 126447752

Start: 1888162

End: 1888284

Strand: Reverse

Name: 126447752

Synonym: BMA10247_A1964

Alternate gene names: NA

Gene position: 1888284-1888162 (Counterclockwise)

Preceding gene: 126447171

Following gene: 126447627

Centisome position: 80.26

GC content: 58.54

Gene sequence:

>123_bases
ATGACGGCCGACGTCGGCATCGGCCGGGTTCGTCGCATCGTGACCATTCGGCGTCGTTTGGTGACGGGTAGCGCGAAAAA
TGGGTTTGTATTTTTCGCCAACGGCATCCGATTGTGCGCGTGA

Upstream 100 bases:

>100_bases
TGCGTGCGAACCCGTCGCTCGTCGAAGCATGGCTCGACGGCGTGCGCACCGCGAGCGGCGCGCCAGGCTTGCCTGCGGTG
CGCGCGGCGCTCGATGCGCA

Downstream 100 bases:

>100_bases
TGCGCAACGGTCGTCGGAGTGGTGCGTCGTTTCAGCAATAGTCGCGGATTCGCGTGCGTAACGCGGGAATCTACTTTCTT
ATCGAATGAGCAGGGTGGGG

Product: outer membrane porin OpcP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 39

Protein sequence:

>40_residues
MTADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA

Sequences:

>Translated_40_residues
MTADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA
>Mature_39_residues
TADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4393; Mature: 4262

Theoretical pI: Translated: 12.63; Mature: 12.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECC
>Mature Secondary Structure 
TADVGIGRVRRIVTIRRRLVTGSAKNGFVFFANGIRLCA
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA