Click here to switch to the map view.

The map label for this gene is 126447746

Identifier: 126447746

GI number: 126447746

Start: 991636

End: 993621

Strand: Direct

Name: 126447746

Synonym: BMA10247_A1057

Alternate gene names: NA

Gene position: 991636-993621 (Clockwise)

Preceding gene: 126447220

Following gene: 126445773

Centisome position: 42.15

GC content: 63.9

Gene sequence:

>1986_bases
ATGAAAATGTCCGACATCGCGGGTTTCCTGAGTCTGCAAAACAGCCGCCTGCTGACGATCAAGACGCCGCTTGCCGGGCG
CTCCGAGCTGGTGCTCAGCGAGTTCCAGTGCAGCGAGGGCCTGTCGGTGCTGTTCGACATGCGGCTGGGGCTCGTGTCGC
GCGATCCGACGATCGAACTGAAGCAGATGATCGGGCAGGCCGTCACGATATCCCTTCAGCCCTCCGGCGCAATCGTCGGC
GGTTCGCCCCGGCATTTTCACGGTTACGTCACGCAGTTTTCGCATACCGGCGCCGACGGCGGGCTCGCCACCTACAGCGC
GACGGTGCAGCCGTGGCTATGGATGCTGTCGCGACGGGTGGATTCGCGAATATTCCAGGACAAGAGCGCACGCGACATTC
TCGACGCGGTGTTCTCGCAATATTCGGCGCTCGCTTCCTACGAATTCCGCGCCGGCCGCACGCTCAAGCCGTACAGCTAT
TGCACGCAGTACCGGGAGACGGATCTGAATTTCGTGCTGCGTCTGATGGAGCTGGAAGGGCTTTTTTTCTATTTCGAGCA
TACGGAGGACGGACACAAGCTGATCATCGACGACGATTCGACCCGTGCAAAACCCATCGACGGGCCGCCGTCGCTGCGAT
ATGCGAGCGGCGAGATTCTCGAGGACGAAGCGGTGGTCACGCAATGGGCGGCGCAGCGGCAACTCATGTCCGGCGCGGTC
AGCATGAAGGCTTACGACTACAAGGTGCCCGCGGCGCGCCGCTACGTGTCGGGCGAAGCCGATTTCAACCAGGGCGAGGT
CGAGCGGTACGAGATCTATGACTACGTCGGCCTGCACGGTTTCGATTCGACCGACCGGGGCGAGGAACTGGCGAGGTTCA
GGCTCGAATCGCTCGCCGCGAGCGGCAAGACCTTTTCGGGCACGAGCACCGGCAGGACGCTCGCGTCCGGCCGCTATTTC
GAATTGAGCGCGCATTACGATCACGACAACGGACCGATGCAGGACCGCCAGTTCCTGTTGACGAACGTCCGCCACCATGG
CGTCAACAATTATCAGTCCAGCGAAGGATCGGGATCGTACCACGCGAGCTTCCAGTGCATCCGCAAGAAGATTCCGTTCC
GGCCGCCGCTCGCGCATGCGCGGCCCGTCATTCCGGGGCCGCAGACGGCGATCGTCGTGGGGCCGAAGGGCGAGCAGATT
CATACCGATGCGCTGGGGCGAGTGAAGATCCAGTTTCATTGGGACCGCATCGGGCAGCGCAATCACGGCAGTTCGTGCTG
GGTGCGGGTGAGCCAGCCATGGGCGGGCGGCGGCTTCGGCTCGGTGCAGATTCCGCGCATCGGCGACGAGGTGGTCGTCA
CGTTCCTCGACGGCAATCCCGATCGTCCGCTGATCATCTCGAGCGTCTACAACGCGCAGAACATGCCGCCGTGGGCGCTG
CCGGCGGGCGCGACGCAAAGCGGGTTCCTCACGCGCTCGCACAAGGGGACGGCCGAGAACGCCAACGCGATTCGCTTCGA
GGACAAGCTGGGCGAGGAGGAAATCTGGCTGCATGCGGAAAGGAACCAGCGCATCGAGGTCGAGCACGACGAATCGCACA
CCGTCGGCGCGAAGCGGACCAAGACGGTCGGCGCGGACGAGATCGTCACGATCGGCGGCGCGCAGACCCACACGATCACG
GGGGCGCGCACGCAGACGATCGGCGCGGACCATACGCAGACCATCAAGGGCGCGCACAAGCAGAACGTCGCCGGCACGCA
TACCCAGGTCATCGGCGGCAACGCGTCGATCACGACCACGGGGCCGCAGCCGGGCGCCGCCGGCACCGTCGGAGATATCG
AGATCCAGTCGAGCCAGGGGAAGATCCATCTCAAGGCGGCGACGGAAATCATCATCGAAGTGGGCGCGAGCGTGATCCAC
CTGAAGGCGGACGGCACGATCGAGATCAGCGGCCCGACGCATATCGGGCTGAATTCGAAGAGCTGA

Upstream 100 bases:

>100_bases
TGAAAAGGCGCTATTTAAATCTTGTTTCAATGGCGTTGCCGTGCGCTATGATTTGCCGTCTTAAATAGGCCGTCGTTAAT
CGGCTATTCCGGGGGCGATA

Downstream 100 bases:

>100_bases
CCGGCCGGGCGGCGGGCCGCGGATGGCCGCGCCCATGGCGACTCCTTTTTCGCGTGCATCGGCACGCGCCACATCGACAT
CGAGACCCGACATGCGCTAT

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; VgrG Family T6SS G; VGR-Related Protein; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Fimbrial Operon Related Protein; Vgr Protein

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MKMSDIAGFLSLQNSRLLTIKTPLAGRSELVLSEFQCSEGLSVLFDMRLGLVSRDPTIELKQMIGQAVTISLQPSGAIVG
GSPRHFHGYVTQFSHTGADGGLATYSATVQPWLWMLSRRVDSRIFQDKSARDILDAVFSQYSALASYEFRAGRTLKPYSY
CTQYRETDLNFVLRLMELEGLFFYFEHTEDGHKLIIDDDSTRAKPIDGPPSLRYASGEILEDEAVVTQWAAQRQLMSGAV
SMKAYDYKVPAARRYVSGEADFNQGEVERYEIYDYVGLHGFDSTDRGEELARFRLESLAASGKTFSGTSTGRTLASGRYF
ELSAHYDHDNGPMQDRQFLLTNVRHHGVNNYQSSEGSGSYHASFQCIRKKIPFRPPLAHARPVIPGPQTAIVVGPKGEQI
HTDALGRVKIQFHWDRIGQRNHGSSCWVRVSQPWAGGGFGSVQIPRIGDEVVVTFLDGNPDRPLIISSVYNAQNMPPWAL
PAGATQSGFLTRSHKGTAENANAIRFEDKLGEEEIWLHAERNQRIEVEHDESHTVGAKRTKTVGADEIVTIGGAQTHTIT
GARTQTIGADHTQTIKGAHKQNVAGTHTQVIGGNASITTTGPQPGAAGTVGDIEIQSSQGKIHLKAATEIIIEVGASVIH
LKADGTIEISGPTHIGLNSKS

Sequences:

>Translated_661_residues
MKMSDIAGFLSLQNSRLLTIKTPLAGRSELVLSEFQCSEGLSVLFDMRLGLVSRDPTIELKQMIGQAVTISLQPSGAIVG
GSPRHFHGYVTQFSHTGADGGLATYSATVQPWLWMLSRRVDSRIFQDKSARDILDAVFSQYSALASYEFRAGRTLKPYSY
CTQYRETDLNFVLRLMELEGLFFYFEHTEDGHKLIIDDDSTRAKPIDGPPSLRYASGEILEDEAVVTQWAAQRQLMSGAV
SMKAYDYKVPAARRYVSGEADFNQGEVERYEIYDYVGLHGFDSTDRGEELARFRLESLAASGKTFSGTSTGRTLASGRYF
ELSAHYDHDNGPMQDRQFLLTNVRHHGVNNYQSSEGSGSYHASFQCIRKKIPFRPPLAHARPVIPGPQTAIVVGPKGEQI
HTDALGRVKIQFHWDRIGQRNHGSSCWVRVSQPWAGGGFGSVQIPRIGDEVVVTFLDGNPDRPLIISSVYNAQNMPPWAL
PAGATQSGFLTRSHKGTAENANAIRFEDKLGEEEIWLHAERNQRIEVEHDESHTVGAKRTKTVGADEIVTIGGAQTHTIT
GARTQTIGADHTQTIKGAHKQNVAGTHTQVIGGNASITTTGPQPGAAGTVGDIEIQSSQGKIHLKAATEIIIEVGASVIH
LKADGTIEISGPTHIGLNSKS
>Mature_661_residues
MKMSDIAGFLSLQNSRLLTIKTPLAGRSELVLSEFQCSEGLSVLFDMRLGLVSRDPTIELKQMIGQAVTISLQPSGAIVG
GSPRHFHGYVTQFSHTGADGGLATYSATVQPWLWMLSRRVDSRIFQDKSARDILDAVFSQYSALASYEFRAGRTLKPYSY
CTQYRETDLNFVLRLMELEGLFFYFEHTEDGHKLIIDDDSTRAKPIDGPPSLRYASGEILEDEAVVTQWAAQRQLMSGAV
SMKAYDYKVPAARRYVSGEADFNQGEVERYEIYDYVGLHGFDSTDRGEELARFRLESLAASGKTFSGTSTGRTLASGRYF
ELSAHYDHDNGPMQDRQFLLTNVRHHGVNNYQSSEGSGSYHASFQCIRKKIPFRPPLAHARPVIPGPQTAIVVGPKGEQI
HTDALGRVKIQFHWDRIGQRNHGSSCWVRVSQPWAGGGFGSVQIPRIGDEVVVTFLDGNPDRPLIISSVYNAQNMPPWAL
PAGATQSGFLTRSHKGTAENANAIRFEDKLGEEEIWLHAERNQRIEVEHDESHTVGAKRTKTVGADEIVTIGGAQTHTIT
GARTQTIGADHTQTIKGAHKQNVAGTHTQVIGGNASITTTGPQPGAAGTVGDIEIQSSQGKIHLKAATEIIIEVGASVIH
LKADGTIEISGPTHIGLNSKS

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72376; Mature: 72376

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSDIAGFLSLQNSRLLTIKTPLAGRSELVLSEFQCSEGLSVLFDMRLGLVSRDPTIEL
CCHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHCCCCHHEEHHHHHCCCCCCCCHHH
KQMIGQAVTISLQPSGAIVGGSPRHFHGYVTQFSHTGADGGLATYSATVQPWLWMLSRRV
HHHCCCEEEEEECCCCEEECCCCCCEEHEEEEEECCCCCCCEEEEECHHHHHHHHHHHHH
DSRIFQDKSARDILDAVFSQYSALASYEFRAGRTLKPYSYCTQYRETDLNFVLRLMELEG
HHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC
LFFYFEHTEDGHKLIIDDDSTRAKPIDGPPSLRYASGEILEDEAVVTQWAAQRQLMSGAV
EEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEECCCCEECCHHHHHHHHHHHHHHHHHH
SMKAYDYKVPAARRYVSGEADFNQGEVERYEIYDYVGLHGFDSTDRGEELARFRLESLAA
EEEEEEEECCHHHHEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
SGKTFSGTSTGRTLASGRYFELSAHYDHDNGPMQDRQFLLTNVRHHGVNNYQSSEGSGSY
CCCCCCCCCCCCEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
HASFQCIRKKIPFRPPLAHARPVIPGPQTAIVVGPKGEQIHTDALGRVKIQFHWDRIGQR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEEEEHHCCCC
NHGSSCWVRVSQPWAGGGFGSVQIPRIGDEVVVTFLDGNPDRPLIISSVYNAQNMPPWAL
CCCCCEEEEECCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCC
PAGATQSGFLTRSHKGTAENANAIRFEDKLGEEEIWLHAERNQRIEVEHDESHTVGAKRT
CCCCCCCCCEEECCCCCCCCCCEEEEHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCC
KTVGADEIVTIGGAQTHTITGARTQTIGADHTQTIKGAHKQNVAGTHTQVIGGNASITTT
CCCCCCCEEEECCCCEEEEECCCEEECCCCCHHHHCCCCCCCCCCCEEEEECCCEEEEEC
GPQPGAAGTVGDIEIQSSQGKIHLKAATEIIIEVGASVIHLKADGTIEISGPTHIGLNSK
CCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCEEEEEECCCEEEECCCEEECCCCC
S
C
>Mature Secondary Structure
MKMSDIAGFLSLQNSRLLTIKTPLAGRSELVLSEFQCSEGLSVLFDMRLGLVSRDPTIEL
CCHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHCCCCHHEEHHHHHCCCCCCCCHHH
KQMIGQAVTISLQPSGAIVGGSPRHFHGYVTQFSHTGADGGLATYSATVQPWLWMLSRRV
HHHCCCEEEEEECCCCEEECCCCCCEEHEEEEEECCCCCCCEEEEECHHHHHHHHHHHHH
DSRIFQDKSARDILDAVFSQYSALASYEFRAGRTLKPYSYCTQYRETDLNFVLRLMELEG
HHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC
LFFYFEHTEDGHKLIIDDDSTRAKPIDGPPSLRYASGEILEDEAVVTQWAAQRQLMSGAV
EEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEECCCCEECCHHHHHHHHHHHHHHHHHH
SMKAYDYKVPAARRYVSGEADFNQGEVERYEIYDYVGLHGFDSTDRGEELARFRLESLAA
EEEEEEEECCHHHHEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
SGKTFSGTSTGRTLASGRYFELSAHYDHDNGPMQDRQFLLTNVRHHGVNNYQSSEGSGSY
CCCCCCCCCCCCEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
HASFQCIRKKIPFRPPLAHARPVIPGPQTAIVVGPKGEQIHTDALGRVKIQFHWDRIGQR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEEEEHHCCCC
NHGSSCWVRVSQPWAGGGFGSVQIPRIGDEVVVTFLDGNPDRPLIISSVYNAQNMPPWAL
CCCCCEEEEECCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCC
PAGATQSGFLTRSHKGTAENANAIRFEDKLGEEEIWLHAERNQRIEVEHDESHTVGAKRT
CCCCCCCCCEEECCCCCCCCCCEEEEHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCC
KTVGADEIVTIGGAQTHTITGARTQTIGADHTQTIKGAHKQNVAGTHTQVIGGNASITTT
CCCCCCCEEEECCCCEEEEECCCEEECCCCCHHHHCCCCCCCCCCCEEEEECCCEEEEEC
GPQPGAAGTVGDIEIQSSQGKIHLKAATEIIIEVGASVIHLKADGTIEISGPTHIGLNSK
CCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCEEEEEECCCEEEECCCEEECCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA