| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447744
Identifier: 126447744
GI number: 126447744
Start: 955736
End: 956593
Strand: Reverse
Name: 126447744
Synonym: BMA10247_A1013
Alternate gene names: NA
Gene position: 956593-955736 (Counterclockwise)
Preceding gene: 126446910
Following gene: 126447467
Centisome position: 40.66
GC content: 67.83
Gene sequence:
>858_bases ATGCCGAAATCGAACTCAACCACTCCCGCCGACGTCGCCCCGGATGCATCGATGTCGAACGAATATACGGTCGACGAGCT CGCGCGCGTGTCCGACACGACGGTGCGCAACGTACGCGCCTATCAGGATCGCGGCCTGCTCGCGCCACCACGCAAACGCG GCCGCGTCGGCATCTACGACGACACGCACGTCGCGCGCCTGAAGGTCATCAATCACCTGCTCGCGCGCGGCTACACGCTG TCGAACATCCAGGACCTGATCAAGGCGATCGACGACGGTCACGACCTTCGCTCGATCCTCGGGCTCGAAAACGCGATCGG CGGCCGCTGGTCGAACGAGCGCCCGCAAACCTTCTCGCTCGCGCAACTGATCCAGATGTTCGGCCCGCAAACGCCCGCAT CGCTCGGGCGCGTCGCGGAGCTCGGTCTGCTCGAGCGGCGCGGCGTGTCGTTCGTCGCGAAGAGTCCGGCGCTCATCGAA GCGGCGGCCGCGATGGTTCGCGAGGGCATTCCCGCGCGCGAGCTGCTCGACGCGATCAGCATCACGCGGCCGTATTTCGA TGCGATCGCACGCGTGCTCGTCGAGCTCGTCGTGCGCCGCCTCGATCGCTACGACGAAGGCTCGCTGCCGCCGCCAACCG ACGTGCCGGCGCTCGTCGACGCGATCTGGCGGCTGCGCCCGCTATCGTCGGTGTTCGTCGAAGGCGAGATGAACCGGGCG CTCGAAGCGGCGTCGAGCGCATACCTCGGCGGCCGCGTCGCGACGATCCTCGACAAGAAGCTGAGCTCGCAGGCCGCGCG CGAGGGCGAGCCCGAACTCGAGCGCGTCACCGCGAAGGGCGCGCCGAAAAAGCGTTAG
Upstream 100 bases:
>100_bases CACCGCGCTGATGCAACGCGTGCTCGGAGACGGCGCACAGACGCCCCCCTCGAACGCCGACGCCTCGCACTGACACGCGC GGTCGCGCTAAAATCGCCGC
Downstream 100 bases:
>100_bases GCGCGCGCGCGTCATATTGTTATCGGCAATGCTTGGTTCGCGCGGGCGCCTGCCCGTGCGACGATTATCCCGACTCGGGC GGCGTGCTCGCCGCCCGCTT
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: MerR-Family Transcriptional Regulator; Transcriptional Regulator MerR Family; Regulatory Protein MerR; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; TRANSCRIPTIONal REGULATOR MerR Family; Merr Family Transcriptional Regulator; Regulatory Protein MerR Family
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MPKSNSTTPADVAPDASMSNEYTVDELARVSDTTVRNVRAYQDRGLLAPPRKRGRVGIYDDTHVARLKVINHLLARGYTL SNIQDLIKAIDDGHDLRSILGLENAIGGRWSNERPQTFSLAQLIQMFGPQTPASLGRVAELGLLERRGVSFVAKSPALIE AAAAMVREGIPARELLDAISITRPYFDAIARVLVELVVRRLDRYDEGSLPPPTDVPALVDAIWRLRPLSSVFVEGEMNRA LEAASSAYLGGRVATILDKKLSSQAAREGEPELERVTAKGAPKKR
Sequences:
>Translated_285_residues MPKSNSTTPADVAPDASMSNEYTVDELARVSDTTVRNVRAYQDRGLLAPPRKRGRVGIYDDTHVARLKVINHLLARGYTL SNIQDLIKAIDDGHDLRSILGLENAIGGRWSNERPQTFSLAQLIQMFGPQTPASLGRVAELGLLERRGVSFVAKSPALIE AAAAMVREGIPARELLDAISITRPYFDAIARVLVELVVRRLDRYDEGSLPPPTDVPALVDAIWRLRPLSSVFVEGEMNRA LEAASSAYLGGRVATILDKKLSSQAAREGEPELERVTAKGAPKKR >Mature_284_residues PKSNSTTPADVAPDASMSNEYTVDELARVSDTTVRNVRAYQDRGLLAPPRKRGRVGIYDDTHVARLKVINHLLARGYTLS NIQDLIKAIDDGHDLRSILGLENAIGGRWSNERPQTFSLAQLIQMFGPQTPASLGRVAELGLLERRGVSFVAKSPALIEA AAAMVREGIPARELLDAISITRPYFDAIARVLVELVVRRLDRYDEGSLPPPTDVPALVDAIWRLRPLSSVFVEGEMNRAL EAASSAYLGGRVATILDKKLSSQAAREGEPELERVTAKGAPKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31157; Mature: 31026
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSNSTTPADVAPDASMSNEYTVDELARVSDTTVRNVRAYQDRGLLAPPRKRGRVGIYD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC DTHVARLKVINHLLARGYTLSNIQDLIKAIDDGHDLRSILGLENAIGGRWSNERPQTFSL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH AQLIQMFGPQTPASLGRVAELGLLERRGVSFVAKSPALIEAAAAMVREGIPARELLDAIS HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH ITRPYFDAIARVLVELVVRRLDRYDEGSLPPPTDVPALVDAIWRLRPLSSVFVEGEMNRA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LEAASSAYLGGRVATILDKKLSSQAAREGEPELERVTAKGAPKKR HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure PKSNSTTPADVAPDASMSNEYTVDELARVSDTTVRNVRAYQDRGLLAPPRKRGRVGIYD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC DTHVARLKVINHLLARGYTLSNIQDLIKAIDDGHDLRSILGLENAIGGRWSNERPQTFSL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH AQLIQMFGPQTPASLGRVAELGLLERRGVSFVAKSPALIEAAAAMVREGIPARELLDAIS HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHH ITRPYFDAIARVLVELVVRRLDRYDEGSLPPPTDVPALVDAIWRLRPLSSVFVEGEMNRA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LEAASSAYLGGRVATILDKKLSSQAAREGEPELERVTAKGAPKKR HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA