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The map label for this gene is bapC [H]

Identifier: 126447736

GI number: 126447736

Start: 703948

End: 704511

Strand: Direct

Name: bapC [H]

Synonym: BMA10247_A0760

Alternate gene names: 126447736

Gene position: 703948-704511 (Clockwise)

Preceding gene: 126447225

Following gene: 126446067

Centisome position: 29.92

GC content: 71.81

Gene sequence:

>564_bases
ATGAGCGCGCGCCGGGCCGAAGCGGCACGCCCGCGCGGGTACGCCGCGCGCATCGCGCGCGTTGCCGCCGCGTTCGCGAT
CGGCATCGTATCGGCGGGCGGCGTCGCGCACGCGGACTGCATCGACGACGCCGCACGGCGCTACGGCGTCAATGCCGATC
TGCTGCGTTCGATCGCGTATTACGAGTCGGGGCTGAATCCGCGCGCGCTGCATCGTAACGGCGACGGGTCGACCGATATC
GGCCTGATGCAGATCAATTCGGTGCATTTGCCGGCGCTGCGCGATCAGGGGATCGACCGTCTGCGGCTGTACGACGCGTC
GATCAACGCGCGCGTGGGCGCGGCACTGCTGCGCCGGCAGATCGATCAATACGGCGACACGTGGCGCGCGGTCGGCGCGT
ACCACTCCCGCACGCCGGGCTTGAGCGAGCGCTATGCGCGCGCGGTTCACGACGTCTATGTCGCGCGGCCCTGGGCGGCA
AAGGCGGCCGCGCGGCGCGACGCGGCGCACACGATGCCGGCGCGCGCGCCGGGGCTCGTGATCGAGGAGGCGTCGGTGCA
GTGA

Upstream 100 bases:

>100_bases
ACATCCGCCTCGATCGCGCGCGGTTTGCCGAAGTCGCAACGGTGGCCGACGTCGCCGCGCTGCTGGGCGCGGCCGCGCGC
GCGGACGATTCGGGAGGCGC

Downstream 100 bases:

>100_bases
GCGGGTGACGAGGGAGGGTGCGCGCGCCGGCATGGTCGGAGCGCGCCGCCGGCTTCGCCTGCGGGCGGCGCGCAGGCACG
GGCGAGCAAGCCGATGCGTG

Product: BapC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSARRAEAARPRGYAARIARVAAAFAIGIVSAGGVAHADCIDDAARRYGVNADLLRSIAYYESGLNPRALHRNGDGSTDI
GLMQINSVHLPALRDQGIDRLRLYDASINARVGAALLRRQIDQYGDTWRAVGAYHSRTPGLSERYARAVHDVYVARPWAA
KAAARRDAAHTMPARAPGLVIEEASVQ

Sequences:

>Translated_187_residues
MSARRAEAARPRGYAARIARVAAAFAIGIVSAGGVAHADCIDDAARRYGVNADLLRSIAYYESGLNPRALHRNGDGSTDI
GLMQINSVHLPALRDQGIDRLRLYDASINARVGAALLRRQIDQYGDTWRAVGAYHSRTPGLSERYARAVHDVYVARPWAA
KAAARRDAAHTMPARAPGLVIEEASVQ
>Mature_186_residues
SARRAEAARPRGYAARIARVAAAFAIGIVSAGGVAHADCIDDAARRYGVNADLLRSIAYYESGLNPRALHRNGDGSTDIG
LMQINSVHLPALRDQGIDRLRLYDASINARVGAALLRRQIDQYGDTWRAVGAYHSRTPGLSERYARAVHDVYVARPWAAK
AAARRDAAHTMPARAPGLVIEEASVQ

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 20200; Mature: 20069

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARRAEAARPRGYAARIARVAAAFAIGIVSAGGVAHADCIDDAARRYGVNADLLRSIAY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
YESGLNPRALHRNGDGSTDIGLMQINSVHLPALRDQGIDRLRLYDASINARVGAALLRRQ
HHCCCCHHEEECCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHH
IDQYGDTWRAVGAYHSRTPGLSERYARAVHDVYVARPWAAKAAARRDAAHTMPARAPGLV
HHHHCCHHHHHHCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEE
IEEASVQ
EECCCCC
>Mature Secondary Structure 
SARRAEAARPRGYAARIARVAAAFAIGIVSAGGVAHADCIDDAARRYGVNADLLRSIAY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
YESGLNPRALHRNGDGSTDIGLMQINSVHLPALRDQGIDRLRLYDASINARVGAALLRRQ
HHCCCCHHEEECCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHH
IDQYGDTWRAVGAYHSRTPGLSERYARAVHDVYVARPWAAKAAARRDAAHTMPARAPGLV
HHHHCCHHHHHHCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEE
IEEASVQ
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7754225; 11677608; 12644504 [H]