Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447712
Identifier: 126447712
GI number: 126447712
Start: 998831
End: 999310
Strand: Direct
Name: 126447712
Synonym: BMA10247_A1060
Alternate gene names: NA
Gene position: 998831-999310 (Clockwise)
Preceding gene: 126445773
Following gene: 126446838
Centisome position: 42.45
GC content: 57.08
Gene sequence:
>480_bases ATGAGCGACTTCATCAAGATTGCAAAGGTTGCAGCGCAAATCGATTGGCAATGGGACGGCGAGTGGTGGGTGCGCGAAGC CTCCAGGCTGGGTTTCAAGCATGAGAAGTCCAGTGCAAGCCTGGAAGTTTACGCCGATCCGGACGGCAATGCGTGGCGAG CCCGCGTCAAGGAAGGGAAGATTCTCTTCATTGAAATCACCTTTGAGAAATTCGTCGATGTCGAATCGCTGTCCGTCTCG GAGTATGAGGACAAGGTGGATGAATTTTTCGCCAGGTTCGAAGCGGCCGTTGCCGAATTGACGCCCGCGCTCGGCAAGCC GGTCTTCTCGGACGGCGCCGCGGCGAAAGGCTTCCCGGACGATCAAGAGGCAAATTGGCTTGCGCTGTGGCGTGTCAAGA ACGCGCGCCTGATGCTGGAGCAGAAGCACGAATCCCGGGAATTTCCATTCCGGCTTTGTTTCGTGATCGCGCCTGCCTGA
Upstream 100 bases:
>100_bases GCAGCATTTCACGCAGCTATTCGAGCAGCATTTCCCTACCGAAATGCAGGGCGGTACGTTGAGTGTCTGGCACGTCCCAG GAAACGGAATGTGAGGGTGT
Downstream 100 bases:
>100_bases TCATTGCCGGCGAACCGTCGCCGCGGCTTGCGCGATGCGTACGTAATCGTTCGCATGCGTTCACAGATGACCGCTATCCG AAGGCCATGACCCCGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSDFIKIAKVAAQIDWQWDGEWWVREASRLGFKHEKSSASLEVYADPDGNAWRARVKEGKILFIEITFEKFVDVESLSVS EYEDKVDEFFARFEAAVAELTPALGKPVFSDGAAAKGFPDDQEANWLALWRVKNARLMLEQKHESREFPFRLCFVIAPA
Sequences:
>Translated_159_residues MSDFIKIAKVAAQIDWQWDGEWWVREASRLGFKHEKSSASLEVYADPDGNAWRARVKEGKILFIEITFEKFVDVESLSVS EYEDKVDEFFARFEAAVAELTPALGKPVFSDGAAAKGFPDDQEANWLALWRVKNARLMLEQKHESREFPFRLCFVIAPA >Mature_158_residues SDFIKIAKVAAQIDWQWDGEWWVREASRLGFKHEKSSASLEVYADPDGNAWRARVKEGKILFIEITFEKFVDVESLSVSE YEDKVDEFFARFEAAVAELTPALGKPVFSDGAAAKGFPDDQEANWLALWRVKNARLMLEQKHESREFPFRLCFVIAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18235; Mature: 18104
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFIKIAKVAAQIDWQWDGEWWVREASRLGFKHEKSSASLEVYADPDGNAWRARVKEGK CCHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCC ILFIEITFEKFVDVESLSVSEYEDKVDEFFARFEAAVAELTPALGKPVFSDGAAAKGFPD EEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DQEANWLALWRVKNARLMLEQKHESREFPFRLCFVIAPA CCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEEECC >Mature Secondary Structure SDFIKIAKVAAQIDWQWDGEWWVREASRLGFKHEKSSASLEVYADPDGNAWRARVKEGK CHHHHHHHHHHHCCEEECCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCC ILFIEITFEKFVDVESLSVSEYEDKVDEFFARFEAAVAELTPALGKPVFSDGAAAKGFPD EEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DQEANWLALWRVKNARLMLEQKHESREFPFRLCFVIAPA CCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA