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The map label for this gene is 126447617

Identifier: 126447617

GI number: 126447617

Start: 898495

End: 899733

Strand: Direct

Name: 126447617

Synonym: BMA10247_A0948

Alternate gene names: NA

Gene position: 898495-899733 (Clockwise)

Preceding gene: 126447436

Following gene: 126446570

Centisome position: 38.19

GC content: 65.29

Gene sequence:

>1239_bases
TTGGCAATCCAAATCAATCGCGGGAGCGGACGGAACATGCACATCAGAACCTGGATCGCGGCCGGCGTCGCCGGCGCAGC
CGTTGCACCCGCTTGCGCGCAAAGCGGCGTCACGCTGTACGGCACGGTGGACACGGGCGTCATCTATTCGACGAACCAGC
AGGTCACGCACGCGGACGGCAGCACGAGCGGCGGGCATGCGTGGCAGATGGGCGGCGGAAACCTCGTGCCTTCGCGATGG
GGATTGCAGGGCACGGAGGCGCTCGGCGGCGGATTGAAGGCCGTGTTTGCGCTCGAGCAGCAATTCCTGTCGGCGAGCGG
GCAGGCATTGCAGGGCGGCGCGGCGTTCAGCCGCCAGGCGTGGGTCGGCTTGCGGCACGACAGATACGGCACGCTCGGCG
TCGGGCGTCAATACGATTCGTACACCGATACGCTCGGCGCGTACGTGTCGAGCAACAGTTGGGCGACGCCATATGGCTCG
CATCTGGGCGACGTCGACAATCTGAATGCGGCGTTCAACTTCAACAACGCGATCAGGTTCACGAGCGCGGATTTCCATGG
CCTGACGTTCGGCGGCACGTTCGGCTTCGGCGGCCAGGCGGGGGATTTCTCCGCGCGTCGCGGCTATGCGCTCGCCGTTG
CGTACAACCGCGCACCGGTCTCGTTCGGCATCGGCTATCTGAACCTGCGGCAGCCGCTCGATGCGGCACTCGGCGGCGCG
AACGGATACATCGGCGATTTCGCATGCGGCAACGCGGGCGCGATGTACTGCCTGCTGCAGGATGCGGTATCGATGAAGGC
GTTCGGCGTCGGCGGATCGATTGCGTTCGGCGAGGCGACCGTTGCGCTGACCTATACGCACACCCGTCTCGGCGACAGCG
CGTATTTCGCCGCCGCGGCGCGTGCGCAGCGCGCGTCGATCGCGTTCGACATCGCCGAGCTGAACGCGACATACGCGTTC
ACGCCGATGCTGCGCGGCGGCATAGCCTACGTCTTCAACCGCGCGAAGGCCGACAGCCGAGGCGTGACGCGTTTTCATCA
ACTGAACGTGGGCGTGAACTACAGTTTGTCGAAACGGACGGCGCTGTATGCGGTCGCGATCGGACAGATCGCATCGGGGC
GCGGGCTCGGCAGCGACGCGAACGGCGATCCCGTGAACTACGCGCAGATTCCCGTATTGGCGAACAGCAATTCGAACCGG
CAGCTCGCGATGATGGCGGGGGTAAAGGTGGATTTCTGA

Upstream 100 bases:

>100_bases
GCGCGCCGGCGGCGCATTTGCCGATTTGGGATACAGGGCCCAAATTTTCGCCGGATAGAGTTCCTCCACTGCCTCCGGTC
GATTCGACTCTGTCGATCGA

Downstream 100 bases:

>100_bases
CGGGCGGCATGTTTGGCACTGCTTGGGATGCCGCCTTGGCGCGGTGTGTTTCGCTTGGCGAAGCAGTCCTGTCGCGTGGC
GGCGTGCGCGTGCGACGCCA

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MAIQINRGSGRNMHIRTWIAAGVAGAAVAPACAQSGVTLYGTVDTGVIYSTNQQVTHADGSTSGGHAWQMGGGNLVPSRW
GLQGTEALGGGLKAVFALEQQFLSASGQALQGGAAFSRQAWVGLRHDRYGTLGVGRQYDSYTDTLGAYVSSNSWATPYGS
HLGDVDNLNAAFNFNNAIRFTSADFHGLTFGGTFGFGGQAGDFSARRGYALAVAYNRAPVSFGIGYLNLRQPLDAALGGA
NGYIGDFACGNAGAMYCLLQDAVSMKAFGVGGSIAFGEATVALTYTHTRLGDSAYFAAAARAQRASIAFDIAELNATYAF
TPMLRGGIAYVFNRAKADSRGVTRFHQLNVGVNYSLSKRTALYAVAIGQIASGRGLGSDANGDPVNYAQIPVLANSNSNR
QLAMMAGVKVDF

Sequences:

>Translated_412_residues
MAIQINRGSGRNMHIRTWIAAGVAGAAVAPACAQSGVTLYGTVDTGVIYSTNQQVTHADGSTSGGHAWQMGGGNLVPSRW
GLQGTEALGGGLKAVFALEQQFLSASGQALQGGAAFSRQAWVGLRHDRYGTLGVGRQYDSYTDTLGAYVSSNSWATPYGS
HLGDVDNLNAAFNFNNAIRFTSADFHGLTFGGTFGFGGQAGDFSARRGYALAVAYNRAPVSFGIGYLNLRQPLDAALGGA
NGYIGDFACGNAGAMYCLLQDAVSMKAFGVGGSIAFGEATVALTYTHTRLGDSAYFAAAARAQRASIAFDIAELNATYAF
TPMLRGGIAYVFNRAKADSRGVTRFHQLNVGVNYSLSKRTALYAVAIGQIASGRGLGSDANGDPVNYAQIPVLANSNSNR
QLAMMAGVKVDF
>Mature_411_residues
AIQINRGSGRNMHIRTWIAAGVAGAAVAPACAQSGVTLYGTVDTGVIYSTNQQVTHADGSTSGGHAWQMGGGNLVPSRWG
LQGTEALGGGLKAVFALEQQFLSASGQALQGGAAFSRQAWVGLRHDRYGTLGVGRQYDSYTDTLGAYVSSNSWATPYGSH
LGDVDNLNAAFNFNNAIRFTSADFHGLTFGGTFGFGGQAGDFSARRGYALAVAYNRAPVSFGIGYLNLRQPLDAALGGAN
GYIGDFACGNAGAMYCLLQDAVSMKAFGVGGSIAFGEATVALTYTHTRLGDSAYFAAAARAQRASIAFDIAELNATYAFT
PMLRGGIAYVFNRAKADSRGVTRFHQLNVGVNYSLSKRTALYAVAIGQIASGRGLGSDANGDPVNYAQIPVLANSNSNRQ
LAMMAGVKVDF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 42914; Mature: 42783

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQINRGSGRNMHIRTWIAAGVAGAAVAPACAQSGVTLYGTVDTGVIYSTNQQVTHADG
CEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEECCCEEEECCC
STSGGHAWQMGGGNLVPSRWGLQGTEALGGGLKAVFALEQQFLSASGQALQGGAAFSRQA
CCCCCEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCC
WVGLRHDRYGTLGVGRQYDSYTDTLGAYVSSNSWATPYGSHLGDVDNLNAAFNFNNAIRF
EEEEECCCCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEE
TSADFHGLTFGGTFGFGGQAGDFSARRGYALAVAYNRAPVSFGIGYLNLRQPLDAALGGA
ECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCEEEEECCCHHHHHCCC
NGYIGDFACGNAGAMYCLLQDAVSMKAFGVGGSIAFGEATVALTYTHTRLGDSAYFAAAA
CCCCCCCCCCCCCEEEEEEHHHHHHEEECCCCEEEECCEEEEEEEEEEECCCCHHHHHHH
RAQRASIAFDIAELNATYAFTPMLRGGIAYVFNRAKADSRGVTRFHQLNVGVNYSLSKRT
HHCCCEEEEEEECCCCEEEECHHHHCCCEEEEECCCCCCCCCEEEEEEECCEEEEECCCE
ALYAVAIGQIASGRGLGSDANGDPVNYAQIPVLANSNSNRQLAMMAGVKVDF
EEEEEEECHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECEEECC
>Mature Secondary Structure 
AIQINRGSGRNMHIRTWIAAGVAGAAVAPACAQSGVTLYGTVDTGVIYSTNQQVTHADG
EEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEECCCEEEECCC
STSGGHAWQMGGGNLVPSRWGLQGTEALGGGLKAVFALEQQFLSASGQALQGGAAFSRQA
CCCCCEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCC
WVGLRHDRYGTLGVGRQYDSYTDTLGAYVSSNSWATPYGSHLGDVDNLNAAFNFNNAIRF
EEEEECCCCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEE
TSADFHGLTFGGTFGFGGQAGDFSARRGYALAVAYNRAPVSFGIGYLNLRQPLDAALGGA
ECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCEEEEECCCHHHHHCCC
NGYIGDFACGNAGAMYCLLQDAVSMKAFGVGGSIAFGEATVALTYTHTRLGDSAYFAAAA
CCCCCCCCCCCCCEEEEEEHHHHHHEEECCCCEEEECCEEEEEEEEEEECCCCHHHHHHH
RAQRASIAFDIAELNATYAFTPMLRGGIAYVFNRAKADSRGVTRFHQLNVGVNYSLSKRT
HHCCCEEEEEEECCCCEEEECHHHHCCCEEEEECCCCCCCCCEEEEEEECCEEEEECCCE
ALYAVAIGQIASGRGLGSDANGDPVNYAQIPVLANSNSNRQLAMMAGVKVDF
EEEEEEECHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]