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The map label for this gene is ydjA [H]

Identifier: 126447582

GI number: 126447582

Start: 1981750

End: 1982373

Strand: Direct

Name: ydjA [H]

Synonym: BMA10247_A2043

Alternate gene names: 126447582

Gene position: 1981750-1982373 (Clockwise)

Preceding gene: 126447260

Following gene: 126447089

Centisome position: 84.23

GC content: 75.32

Gene sequence:

>624_bases
ATGAATGCCACAGCCTGCGCGGCGCCCGCCGGCGCCGCCGTTGCCGACGACCCGCGCGGCCTGCTGCGGGGACTGCTGTC
GCGCCGCTCCCGCTGGCCGCTGACCGAACCGGCGCCCGGCCCGCGCGAACTCGACGCCATCTTCGACGCCGCCTTGCGCG
CGCCCGATCACGGCAACCTGCGTCCGTGGCGCTTCGTCGTGATCCGCGGCGCCGCGCGTCACGCATTCGGCGATCTGCTG
GTCGAGCTGGCCGACGCGCGCGCACCCGACGCCCCGCCCGGCTCGCACGCGCACCGCCGCGCGAAGGCGCTCGCCGCGCC
GCTCATCGTCGCGCTCGGCGCGGCGCTGAACCGCGCCTCGAAAGTACCCGAGGTCGAGCAGTTGCTCGCCGTCGGCGCGG
CCGCGATGAACATGCTGAACGCGGTCCACCAGCTCGGCTACGGCGGCTTCTGGGCAACGGGCGCCGATTCGTACGAGCCG
GCGATGCGCGACGCGCTCGGCTTCGGCGCCGACGAACGGCTCATCGGCTTGCTGTACATCGGCACGCCGTCCGCACCCGC
GAGCGACGCGCGCCGCCCGGATCGCGCCGCACACGTGCGCGAATGGCTCGGCCCCGCACGCTGA

Upstream 100 bases:

>100_bases
GTATCGAATCAGCGACATTGATAAATGAGAATCATTTGCATTTAAAGCAAAACTGGCCGATGATATCCCTCATGCATCGA
CCGATACCCGAACCTCGACC

Downstream 100 bases:

>100_bases
CGGCCGCGCCGCCCGACACCCACGCGCGGCTCGCCGTTCGCTCGCGCGCCGCATCGAATTCCGGAGGTTCCGCCATGCAT
TTCCCTCACGCCGCCCTGAA

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNATACAAPAGAAVADDPRGLLRGLLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNLRPWRFVVIRGAARHAFGDLL
VELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRASKVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGADSYEP
AMRDALGFGADERLIGLLYIGTPSAPASDARRPDRAAHVREWLGPAR

Sequences:

>Translated_207_residues
MNATACAAPAGAAVADDPRGLLRGLLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNLRPWRFVVIRGAARHAFGDLL
VELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRASKVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGADSYEP
AMRDALGFGADERLIGLLYIGTPSAPASDARRPDRAAHVREWLGPAR
>Mature_207_residues
MNATACAAPAGAAVADDPRGLLRGLLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNLRPWRFVVIRGAARHAFGDLL
VELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRASKVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGADSYEP
AMRDALGFGADERLIGLLYIGTPSAPASDARRPDRAAHVREWLGPAR

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=169, Percent_Identity=38.4615384615385, Blast_Score=113, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21805; Mature: 21805

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATACAAPAGAAVADDPRGLLRGLLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
RPWRFVVIRGAARHAFGDLLVELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRAS
CCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGADSYEPAMRDALGFGADERLIGLLYI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCCCCCCEEEEEEE
GTPSAPASDARRPDRAAHVREWLGPAR
CCCCCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNATACAAPAGAAVADDPRGLLRGLLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
RPWRFVVIRGAARHAFGDLLVELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRAS
CCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGADSYEPAMRDALGFGADERLIGLLYI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCCCCCCEEEEEEE
GTPSAPASDARRPDRAAHVREWLGPAR
CCCCCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]