Click here to switch to the map view.

The map label for this gene is ompA [H]

Identifier: 126447564

GI number: 126447564

Start: 934950

End: 935780

Strand: Direct

Name: ompA [H]

Synonym: BMA10247_A0986

Alternate gene names: 126447564

Gene position: 934950-935780 (Clockwise)

Preceding gene: 126447035

Following gene: 126446167

Centisome position: 39.74

GC content: 67.15

Gene sequence:

>831_bases
ATGAAAATGAACAGGATGTCGAAATATGCGGCCGCCGCCGGGATCTGCGCGGCGCTGCTGACGGGATGCGGAATGGCGCC
GACGAGCGCGCCGGACGGCTCGGTCGGGTTTCCGGCGCGCGACAGCGCGTGGCTGAAGGAAGGCACGTTCGTGAATGTCG
AGAACCTGCGCCAGATCGGGCCCGGTCTCGACAAGAACCAGGTATATGCACTGATCGGCGAGCCGCACTTCAGCGAGGGC
ATCATCGGCGTACACGTGTGGAACTATGTATTCAATTTCCGCACGGGGCCGGGGGCGAGCGATGTCGTGACGTGCCAGTA
CCAGATCCAGTACGACAAGCACTATCGCGTGAAATCGACGTACTGGAAGGAGCCGGCGTGCAAGGCGCTCGTCGACGGCC
CGAAGCCGGCGCCCGCCGTGCAGGCGCCGCCGGGCGACGACGTGAAGCAGTTCACGCTCGATTACCAACTGCTGTTCCCG
TTCGACAAATCGGCGCTGCGCGACCTGCTGCCGGCCGGGCGGGCCGAACTGGACCGGATCGCGGCCACGCTGGAGCAGCA
GTACCAGCACATCCGCTCGGTGCGGGTCACGGGCTACACCGACCGGCTCGGCACGGACGCATACAATCGGCAGCTGTCGC
TCGCGCGGGCCGAAACGATTCGTGCGTATCTGACGACGCGCGGCCTGCCCGGCGATCTGATCGTCGCGCAGGGGCTCGGC
AAAGCCGATCCGGTGAGCAACGGCTGCCCCGCCGGGCGTTCGGCGGAGGCGATCGCGTGTCTCGCGCCGGACCGGCGCGT
GAGGATCGACGTCGCCGGCGAACGGCGCTAG

Upstream 100 bases:

>100_bases
GGCGGCACGGGCGCGGTGCTCGGGGCCGGTTATCAGTGGTGACGCGAGTCGCAACGGCGGCCGGCGCGGCGCCGGCCGTG
GAGACGATAAGGAATCCAAT

Downstream 100 bases:

>100_bases
TCTCGCGGCTGGCCGGCGCAACCCGGCCGGCTGCACGTCGGCCTGCATCGGCGCCCATCGCGGCGCCGATGTGCTTTTGG
CGCGCACGATCGGCTCGGCA

Product: OmpA/SmpA/OmlA family outer membrane lipoprotein

Products: NA

Alternate protein names: Outer membrane protein II [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKMNRMSKYAAAAGICAALLTGCGMAPTSAPDGSVGFPARDSAWLKEGTFVNVENLRQIGPGLDKNQVYALIGEPHFSEG
IIGVHVWNYVFNFRTGPGASDVVTCQYQIQYDKHYRVKSTYWKEPACKALVDGPKPAPAVQAPPGDDVKQFTLDYQLLFP
FDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLG
KADPVSNGCPAGRSAEAIACLAPDRRVRIDVAGERR

Sequences:

>Translated_276_residues
MKMNRMSKYAAAAGICAALLTGCGMAPTSAPDGSVGFPARDSAWLKEGTFVNVENLRQIGPGLDKNQVYALIGEPHFSEG
IIGVHVWNYVFNFRTGPGASDVVTCQYQIQYDKHYRVKSTYWKEPACKALVDGPKPAPAVQAPPGDDVKQFTLDYQLLFP
FDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLG
KADPVSNGCPAGRSAEAIACLAPDRRVRIDVAGERR
>Mature_276_residues
MKMNRMSKYAAAAGICAALLTGCGMAPTSAPDGSVGFPARDSAWLKEGTFVNVENLRQIGPGLDKNQVYALIGEPHFSEG
IIGVHVWNYVFNFRTGPGASDVVTCQYQIQYDKHYRVKSTYWKEPACKALVDGPKPAPAVQAPPGDDVKQFTLDYQLLFP
FDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVRVTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLG
KADPVSNGCPAGRSAEAIACLAPDRRVRIDVAGERR

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=128, Percent_Identity=45.3125, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 30060; Mature: 30060

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNRMSKYAAAAGICAALLTGCGMAPTSAPDGSVGFPARDSAWLKEGTFVNVENLRQIG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCEECHHHHHHHC
PGLDKNQVYALIGEPHFSEGIIGVHVWNYVFNFRTGPGASDVVTCQYQIQYDKHYRVKST
CCCCCCCEEEEECCCCCCCCEEEEEEEEEHEECCCCCCCCCEEEEEEEEEECCCEEECCC
YWKEPACKALVDGPKPAPAVQAPPGDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRI
CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCHHHHHHHCCCCHHHHHHH
AATLEQQYQHIRSVRVTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLG
HHHHHHHHHHHHHEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
KADPVSNGCPAGRSAEAIACLAPDRRVRIDVAGERR
CCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCC
>Mature Secondary Structure
MKMNRMSKYAAAAGICAALLTGCGMAPTSAPDGSVGFPARDSAWLKEGTFVNVENLRQIG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCEECHHHHHHHC
PGLDKNQVYALIGEPHFSEGIIGVHVWNYVFNFRTGPGASDVVTCQYQIQYDKHYRVKST
CCCCCCCEEEEECCCCCCCCEEEEEEEEEHEECCCCCCCCCEEEEEEEEEECCCEEECCC
YWKEPACKALVDGPKPAPAVQAPPGDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRI
CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCHHHHHHHCCCCHHHHHHH
AATLEQQYQHIRSVRVTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLG
HHHHHHHHHHHHHEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
KADPVSNGCPAGRSAEAIACLAPDRRVRIDVAGERR
CCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1955870 [H]