| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447553
Identifier: 126447553
GI number: 126447553
Start: 2198158
End: 2198850
Strand: Direct
Name: 126447553
Synonym: BMA10247_A2266
Alternate gene names: NA
Gene position: 2198158-2198850 (Clockwise)
Preceding gene: 126446953
Following gene: 126445840
Centisome position: 93.43
GC content: 73.02
Gene sequence:
>693_bases ATGACATCGACTCACCGCTGGCTCGTCATCTCGCCGCATCTGGACGACGGCGTGTTCGGCTGCGGCCAGTTGCTCGCGCA GTCGCCCGGCTCCGCCGTCGTCACGGTGTTCGCCGGCGTGCCGCCGCCGCGCACGCCCGCGCCGCCGTGGGACCGCCGCG CGGGCTTCGCGACGGGCGCCGACGCGATGCGCGCGCGGCGCGCGGAAGATGCCCGCGCGCTGCGCGTGCTCGACGCGACA CCCGTCTGGCTCGATTTTCTCGACGATCAATACGGCGCACCGGCCGCGCCCGACGACATCGCCAAGCAGCTCGCCGCCAC GCTCGACGCGCATCCCGGCTTCGACGTCGCCGCGCCCGCCGGGCTGTTTCATCGCGATCATCTCGCAACGAATCGCGCGG CGCTCGCGGTCCTCGCGCGCGGCCCCCGCGCGCGTCGCTGGCTGTTCTACGAGGACGCGCTGTACCGCCGCGTCGACGAC CTGATGGCCAAGCGGCTCGCCGACTGGCGCCGGCAAGGCTGGATCGCGCGGGTCGCCGCGCCGCTCGCGCACGCGCGCGC GGGCCGCGCGGCCAAAGCCGAGGCCGTGCGTGCGTACGCGAGCCAGGTTGCCCTCTTCGACGCTCATGCGCTCGTCGACC TCCATGTTTCCGAAACCTACTGGCGCCTCCAATGCGAGACCTCATCAGCGTAA
Upstream 100 bases:
>100_bases GCGCGCGCGCAGCCGGACGCGCCGCGGCGGCACGGAAGTTGCGGCTCCGCACGGGCAAGCCGCGCATCCGCGCACGCGGC ACCGGGGAGGCTCGCGGACC
Downstream 100 bases:
>100_bases CGCCCGCGCGCGTCGACATGCCGACGCGCGAGCCGCGCATGACCGCGATCGTGCTCACGCACCGCCGCGAATCCGAGCTC GCGCGCACGCTCGCGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: LmbE-Like Protein
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTSTHRWLVISPHLDDGVFGCGQLLAQSPGSAVVTVFAGVPPPRTPAPPWDRRAGFATGADAMRARRAEDARALRVLDAT PVWLDFLDDQYGAPAAPDDIAKQLAATLDAHPGFDVAAPAGLFHRDHLATNRAALAVLARGPRARRWLFYEDALYRRVDD LMAKRLADWRRQGWIARVAAPLAHARAGRAAKAEAVRAYASQVALFDAHALVDLHVSETYWRLQCETSSA
Sequences:
>Translated_230_residues MTSTHRWLVISPHLDDGVFGCGQLLAQSPGSAVVTVFAGVPPPRTPAPPWDRRAGFATGADAMRARRAEDARALRVLDAT PVWLDFLDDQYGAPAAPDDIAKQLAATLDAHPGFDVAAPAGLFHRDHLATNRAALAVLARGPRARRWLFYEDALYRRVDD LMAKRLADWRRQGWIARVAAPLAHARAGRAAKAEAVRAYASQVALFDAHALVDLHVSETYWRLQCETSSA >Mature_229_residues TSTHRWLVISPHLDDGVFGCGQLLAQSPGSAVVTVFAGVPPPRTPAPPWDRRAGFATGADAMRARRAEDARALRVLDATP VWLDFLDDQYGAPAAPDDIAKQLAATLDAHPGFDVAAPAGLFHRDHLATNRAALAVLARGPRARRWLFYEDALYRRVDDL MAKRLADWRRQGWIARVAAPLAHARAGRAAKAEAVRAYASQVALFDAHALVDLHVSETYWRLQCETSSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25106; Mature: 24974
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTHRWLVISPHLDDGVFGCGQLLAQSPGSAVVTVFAGVPPPRTPAPPWDRRAGFATGA CCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCH DAMRARRAEDARALRVLDATPVWLDFLDDQYGAPAAPDDIAKQLAATLDAHPGFDVAAPA HHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC GLFHRDHLATNRAALAVLARGPRARRWLFYEDALYRRVDDLMAKRLADWRRQGWIARVAA CHHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH PLAHARAGRAAKAEAVRAYASQVALFDAHALVDLHVSETYWRLQCETSSA HHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCC >Mature Secondary Structure TSTHRWLVISPHLDDGVFGCGQLLAQSPGSAVVTVFAGVPPPRTPAPPWDRRAGFATGA CCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCH DAMRARRAEDARALRVLDATPVWLDFLDDQYGAPAAPDDIAKQLAATLDAHPGFDVAAPA HHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC GLFHRDHLATNRAALAVLARGPRARRWLFYEDALYRRVDDLMAKRLADWRRQGWIARVAA CHHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH PLAHARAGRAAKAEAVRAYASQVALFDAHALVDLHVSETYWRLQCETSSA HHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA