Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447479
Identifier: 126447479
GI number: 126447479
Start: 1691586
End: 1692968
Strand: Direct
Name: 126447479
Synonym: BMA10247_A1756
Alternate gene names: NA
Gene position: 1691586-1692968 (Clockwise)
Preceding gene: 126446733
Following gene: 126446479
Centisome position: 71.9
GC content: 65.51
Gene sequence:
>1383_bases TTGGCGATTCATCATCGCCCGTCGATTTCCGGCGATATATCGAAACAGCATTCAATCGATCAAGCGACCATGTTCGAATC GTTCAACAAGGACGTCGTCGATGCGTTTGCCAGAAACAAGCGCAGGCTGACGAAAAACGCGGCGAGCCGCCAGGTGCGGG CGCTGCTGGACGAAGTCAGCGCGTCGGCGTTCAAGCTGCTGCCCCATCCGTTTCTCTTTCCCGCCGACGAGTTCGAAATG CTGGCCCGGCGCGCGCGCGCGTTGCTGCGCGCGCAGAACAAAATCGTGCGGCATCTGTGCCGGCACCGCCCGCGGGCGGA CCTGCTCGCGCAGTGCTCGCTGAACCCGGCGCTCGCGCGCTATGTCGACTGGGACGAACTCGAGGCGGGCCGCCGCCGGG TGGCCCGCGTCGACATCCTGCCGTTACCGGACGGCTATGCGGTGTGCGAGCTGAATTTCTCGGCCGCGGTGGGCGGCGCC GAGCTGTTCGACTGCCATCGCCGGTTCATGCAGGCATCGGGTTGGCCCGCCTTCGAGCGCGGCGGCTCGCCGTATGCGAA CCTGCGCGCGCTCTACGAGGACACGCTCCGATCGATGGAAATCGACCGGATCGTGCTGCTCGACTGGAGCTCGCACGCCG CCCGAGGCTATGCGACGCCCGAGCTCGCGCGTCGATATCTCGCGGGCATCGCGAACGGCATGCCGGTCGACGTCCACACC GAATTGACCTACCCGTCGAAGTGGCTGGGCAACGGCCGAGGCAAGGGCATCCTGATCCACCGGAATTTCGTCTACGACGA CGTGACGGTGAACGCCGATCGCTTCGACGCCATTCACCGCAGCGGCGCGACGTTTTCGAACGGACTGGAAGCCGAGCTGC TGATGAGCAAGGCATGGCTTGCACTGCTGTGCGACGCGCGCTTTCATCCGCTCCTCGACGAAGACGAGATCGCGGCGATC CGGAACCATGTGCCGCACACGTTTCGCCTCGACGAGGGCACGTTCGCCGAGGCGCTGGCTCACAAGGACGAATGGGTGTT CAAGCTGAACGTGTCCTACGGCGGCGTCGACGTGCTGATCGGCAAGGATCATCCGGCCGACGCGCTGGCCGATCGGCTGC GCCGACAGGGCATCGCCAACTGGATTTGCCAGGCGTTCCGCGCGGTGCAGACGATTCGCCACCCTTTCGACGACACCTTC GTCGCCGCCGAGCACAAGCCCGTGCTGGGAATGTATCTGCACCGCGACGACGCGAGCGGCATGGCGCTGCGCTCGAACCG CTTTTCGAGCGTGGTGAATGCGGGCAGCGGGGCCGGCGTTCACTGGGCGGCCGTCGTCACCGAAGCGGAAAAAGCGGCGC TACTCGCCGCGATGGACGGCTGA
Upstream 100 bases:
>100_bases CGTTTCGCCCCGCATCGAAGCCGCGCACGAATCGTAAAAAATATGGCAGCATGGCGACACGCCGCCGCCCCGACATAAAA CAACTCGATTTCCTTGATTA
Downstream 100 bases:
>100_bases GGTCCGGCCACGCGCGCCGTCCCGCGCATGCGCCGCGCGGCGACGCGCTGCCTAGGATATCGAAGCATTCTTGGCGTATC GGATTTCAGGCGAAACAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MAIHHRPSISGDISKQHSIDQATMFESFNKDVVDAFARNKRRLTKNAASRQVRALLDEVSASAFKLLPHPFLFPADEFEM LARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALARYVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGA ELFDCHRRFMQASGWPAFERGGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHT ELTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWLALLCDARFHPLLDEDEIAAI RNHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLIGKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTF VAAEHKPVLGMYLHRDDASGMALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG
Sequences:
>Translated_460_residues MAIHHRPSISGDISKQHSIDQATMFESFNKDVVDAFARNKRRLTKNAASRQVRALLDEVSASAFKLLPHPFLFPADEFEM LARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALARYVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGA ELFDCHRRFMQASGWPAFERGGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHT ELTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWLALLCDARFHPLLDEDEIAAI RNHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLIGKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTF VAAEHKPVLGMYLHRDDASGMALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG >Mature_459_residues AIHHRPSISGDISKQHSIDQATMFESFNKDVVDAFARNKRRLTKNAASRQVRALLDEVSASAFKLLPHPFLFPADEFEML ARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALARYVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGAE LFDCHRRFMQASGWPAFERGGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHTE LTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWLALLCDARFHPLLDEDEIAAIR NHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLIGKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTFV AAEHKPVLGMYLHRDDASGMALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51338; Mature: 51207
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHHRPSISGDISKQHSIDQATMFESFNKDVVDAFARNKRRLTKNAASRQVRALLDEVS CCCCCCCCCCCCCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAFKLLPHPFLFPADEFEMLARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALAR HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHH YVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGAELFDCHRRFMQASGWPAFER HCCHHHHHHHHHHEEEEEEEECCCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCHHC GGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHT CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE ELTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWL CCCCCHHHCCCCCCCEEEEEECEEECCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ALLCDARFHPLLDEDEIAAIRNHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLI HHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHCCCCEEEEEEECCCCEEEEE GKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTFVAAEHKPVLGMYLHRDDASG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCC MALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG CEEHHHHHHHHHCCCCCCCEEEHHHHHHHHHHEEEEECCC >Mature Secondary Structure AIHHRPSISGDISKQHSIDQATMFESFNKDVVDAFARNKRRLTKNAASRQVRALLDEVS CCCCCCCCCCCCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAFKLLPHPFLFPADEFEMLARRARALLRAQNKIVRHLCRHRPRADLLAQCSLNPALAR HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHH YVDWDELEAGRRRVARVDILPLPDGYAVCELNFSAAVGGAELFDCHRRFMQASGWPAFER HCCHHHHHHHHHHEEEEEEEECCCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCHHC GGSPYANLRALYEDTLRSMEIDRIVLLDWSSHAARGYATPELARRYLAGIANGMPVDVHT CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE ELTYPSKWLGNGRGKGILIHRNFVYDDVTVNADRFDAIHRSGATFSNGLEAELLMSKAWL CCCCCHHHCCCCCCCEEEEEECEEECCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ALLCDARFHPLLDEDEIAAIRNHVPHTFRLDEGTFAEALAHKDEWVFKLNVSYGGVDVLI HHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHCCCCEEEEEEECCCCEEEEE GKDHPADALADRLRRQGIANWICQAFRAVQTIRHPFDDTFVAAEHKPVLGMYLHRDDASG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCC MALRSNRFSSVVNAGSGAGVHWAAVVTEAEKAALLAAMDG CEEHHHHHHHHHCCCCCCCEEEHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA