Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is phnW [H]
Identifier: 126447464
GI number: 126447464
Start: 1962543
End: 1963610
Strand: Direct
Name: phnW [H]
Synonym: BMA10247_A2028
Alternate gene names: 126447464
Gene position: 1962543-1963610 (Clockwise)
Preceding gene: 126446246
Following gene: 126446043
Centisome position: 83.42
GC content: 71.63
Gene sequence:
>1068_bases ATGCTGTTGCTGAATCCCGGTCCCGTGACGCTGACGGAGCGTGTGCGCCAAAGCCTGCTGCAGCCGGACCTGTGCCACCG CGAAAGCGAATTCTTCGATCTGCAGGACGAGGCGCGCGCGCGGCTCGTCGCCGCGTACGCGCTCGATCCGGCCGAATGGA GCGCGGTGCTGATGACGGGCTCCGGCACGGCCGCGGTCGAGAGCATGATCGCCGCGCTCGTGCCGGAAAACGGCAAGCTG CTCGTGATCGAGAACGGCGTGTACGGCGAGCGGATCACGCAGATCGCGACGCAGTACCGGATCGCGCACGACGTGCTGAA ACACGACTGGATGCAGGCGCCGGATCTCGCGCGCGTCGCCGAGAAGCTCGACGCGGATCGCGCGATCACGCATGTCGCGG TGATCCATCACGAAACGACCACGGGCCGCCTGAACGACCTCGACGCGCTCGCCGCCGTGTGCCGCGCGCGCGGCGTGCGC ATGCTCGTCGACGGCGTGAGCAGCTTCGGCGCGGAGGCGGTCGATTTCGCGGGCGGCGACATCGACGCGCTCGCCGCGAC CGCGAACAAGTGCCTACACGGCGTGCCGGGCGCGGCGTTCGTGATCGTGCGCCGCCGCGCGCTCGCGAGTGCCGCGAGCC GCACCTACTACCTCGATCTCGGCCGGCTCGCGAAGCTGCAGGACGCGCGCAACACGCCGTTCACGCCGTCGGTGCACGCG TACTACGCGCTCGTCGAGGCGCTGCGCGAGTTCGACGAGGCGGGCGGCTGGCGCGCGCGCCACGCGCGCTACGCGGCGCT CGCCGAACAGGTGCGCGCCGGCCTCGCCGCGCGCGGCATGCCGCTCGTGCTGCCGGACGGCGAATCGTCGGTCGTGCTGC GCGCGTACCGGCTGCCCGCCGGCGTCGCGTACGAGCAACTGCACGACGGCCTGAAAGCGCGCGGCTTCGTGATCTACGCG GGCCAGGGCGGGCTGTCGAGCGCGTTGTTCCGCGTGTCGACGATGGGCGCGATCGAGCCCGCGGACGTCGAGCGCCTCCT CGACGGATTCACCGCGCTCGCGCGCTGA
Upstream 100 bases:
>100_bases TGCCCGACGGCCTGCCCCGCCCGACGGTGACGCCCGTCGACGTGAAAACGCGCCTGATGCGCCACATCGGCGCGATGCCG GCCTGACAAGGAGTACGAAG
Downstream 100 bases:
>100_bases TCCCGCCCGGCGGCGTCGCGCTCGAATCGCGCGGCGCCGCTTTCCCGGGCCCACGCCCCGCTTTGCTCCCCGCGAAAACG CGCCGCCGCGCGGGCCGCCC
Product: 2-aminoethylphosphonate-pyruvate transaminase
Products: NA
Alternate protein names: 2-aminoethylphosphonate aminotransferase; AEP transaminase; AEPT [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MLLLNPGPVTLTERVRQSLLQPDLCHRESEFFDLQDEARARLVAAYALDPAEWSAVLMTGSGTAAVESMIAALVPENGKL LVIENGVYGERITQIATQYRIAHDVLKHDWMQAPDLARVAEKLDADRAITHVAVIHHETTTGRLNDLDALAAVCRARGVR MLVDGVSSFGAEAVDFAGGDIDALAATANKCLHGVPGAAFVIVRRRALASAASRTYYLDLGRLAKLQDARNTPFTPSVHA YYALVEALREFDEAGGWRARHARYAALAEQVRAGLAARGMPLVLPDGESSVVLRAYRLPAGVAYEQLHDGLKARGFVIYA GQGGLSSALFRVSTMGAIEPADVERLLDGFTALAR
Sequences:
>Translated_355_residues MLLLNPGPVTLTERVRQSLLQPDLCHRESEFFDLQDEARARLVAAYALDPAEWSAVLMTGSGTAAVESMIAALVPENGKL LVIENGVYGERITQIATQYRIAHDVLKHDWMQAPDLARVAEKLDADRAITHVAVIHHETTTGRLNDLDALAAVCRARGVR MLVDGVSSFGAEAVDFAGGDIDALAATANKCLHGVPGAAFVIVRRRALASAASRTYYLDLGRLAKLQDARNTPFTPSVHA YYALVEALREFDEAGGWRARHARYAALAEQVRAGLAARGMPLVLPDGESSVVLRAYRLPAGVAYEQLHDGLKARGFVIYA GQGGLSSALFRVSTMGAIEPADVERLLDGFTALAR >Mature_355_residues MLLLNPGPVTLTERVRQSLLQPDLCHRESEFFDLQDEARARLVAAYALDPAEWSAVLMTGSGTAAVESMIAALVPENGKL LVIENGVYGERITQIATQYRIAHDVLKHDWMQAPDLARVAEKLDADRAITHVAVIHHETTTGRLNDLDALAAVCRARGVR MLVDGVSSFGAEAVDFAGGDIDALAATANKCLHGVPGAAFVIVRRRALASAASRTYYLDLGRLAKLQDARNTPFTPSVHA YYALVEALREFDEAGGWRARHARYAALAEQVRAGLAARGMPLVLPDGESSVVLRAYRLPAGVAYEQLHDGLKARGFVIYA GQGGLSSALFRVSTMGAIEPADVERLLDGFTALAR
Specific function: Involved in phosphonate degradation [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=305, Percent_Identity=26.2295081967213, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17536281, Length=346, Percent_Identity=24.2774566473988, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI17530823, Length=356, Percent_Identity=22.4719101123595, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017688 - InterPro: IPR000192 - InterPro: IPR012703 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.37 [H]
Molecular weight: Translated: 38267; Mature: 38267
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLNPGPVTLTERVRQSLLQPDLCHRESEFFDLQDEARARLVAAYALDPAEWSAVLMTG CEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHEECCCCCCEEEEEEC SGTAAVESMIAALVPENGKLLVIENGVYGERITQIATQYRIAHDVLKHDWMQAPDLARVA CCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EKLDADRAITHVAVIHHETTTGRLNDLDALAAVCRARGVRMLVDGVSSFGAEAVDFAGGD HHHCHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCC IDALAATANKCLHGVPGAAFVIVRRRALASAASRTYYLDLGRLAKLQDARNTPFTPSVHA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCHHHH YYALVEALREFDEAGGWRARHARYAALAEQVRAGLAARGMPLVLPDGESSVVLRAYRLPA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCC GVAYEQLHDGLKARGFVIYAGQGGLSSALFRVSTMGAIEPADVERLLDGFTALAR CCHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLLNPGPVTLTERVRQSLLQPDLCHRESEFFDLQDEARARLVAAYALDPAEWSAVLMTG CEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHEECCCCCCEEEEEEC SGTAAVESMIAALVPENGKLLVIENGVYGERITQIATQYRIAHDVLKHDWMQAPDLARVA CCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EKLDADRAITHVAVIHHETTTGRLNDLDALAAVCRARGVRMLVDGVSSFGAEAVDFAGGD HHHCHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCCC IDALAATANKCLHGVPGAAFVIVRRRALASAASRTYYLDLGRLAKLQDARNTPFTPSVHA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCHHHH YYALVEALREFDEAGGWRARHARYAALAEQVRAGLAARGMPLVLPDGESSVVLRAYRLPA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCC GVAYEQLHDGLKARGFVIYAGQGGLSSALFRVSTMGAIEPADVERLLDGFTALAR CCHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA