| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is aroE [H]
Identifier: 126447361
GI number: 126447361
Start: 845045
End: 845899
Strand: Direct
Name: aroE [H]
Synonym: BMA10247_A0893
Alternate gene names: 126447361
Gene position: 845045-845899 (Clockwise)
Preceding gene: 126447489
Following gene: 126446408
Centisome position: 35.92
GC content: 73.22
Gene sequence:
>855_bases ATGAGCGGGCGTTCGTTTCTGATCGGCCTGATCGGCGCCGGGATCGGCGGCTCGCTGTCGCCCGCGATGCACGAGGCGGA GGGGCGCCGGCAGGGTCTGAACTACGTGTACCGGCGCATCGATCTCGACGCGCTGGGGCTGACGGCCGACGCGCTGCCCG AGCTGCTCGCGACCGCCGAGCGGATGGGCTTCGACGGGCTGAACATCACGCATCCGTGCAAGCAGCGCGTGATCGAGCAT CTCGACGAATTGTCGGCGGACGCGGCCGCGCTCGGCGCGGTCAACACGGTGTGCTTCGCGCACGGCCGGCGCATCGGCCA CAACACCGATTGGTCGGGCTTCGCGAAGGCGTTCGCGCGCGGGCTGCCGGGCGCGTCGCTCGAGCGCGTCGTGCAGCTTG GCGCGGGCGGCGCGGGCGCGGCCGTCGCGCACGCGGCGCTCACGATGGGCGCCGCGCAACTCGCGCTCTTCGACGTCGAC CCCGTGCGCGCGCGCTCGCTTGCCGACCAGTTGCAGGCGCGCTTTCCGCACGCGCGGCTGAGCGCCGGCGGCACGCTCGC CGACGCGCTCGCGAACGCGACCGGCCTCATTCACGCGACGCCGACGGGCATGCTCGGGCATCCGGGCCTGCCGCTGCCGG CGCACCTGCTGCGAAGCGGGCTCTGGGTGGCCGACATCGTCTATTTTCCGCTCGAGACCGAGCTGATCCGCGCGGCGCGC GCGCTCGGCTGCCGCACGCTGCCGGGCGGCGGCATGGCGGTCTATCAGGCGGTCGATGCGTTCGAGCTCTTCACGGGCCG CGCGCCGGATGCCGAGCGAATGTTCGAGCACTTCCGGGCGCTCGTCGCGCGCTGA
Upstream 100 bases:
>100_bases TCTCGGCGCTCGCCGATGGCGTGATCTGCGGCTGCGGCACCGAGGGCTACGTGTTCGCGCTGCGGCGGCTCGCGACGCTG ATCGGCGGGGAGGGCACGCG
Downstream 100 bases:
>100_bases ATTTTCCCCCAATCCGCACATAAAGACAGATACATCAGGAGACATCGATGCCCCAGCCGATCCACACCGACGCCGCGCCG CGCGCGGCCGTCGCGGCCGC
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSGRSFLIGLIGAGIGGSLSPAMHEAEGRRQGLNYVYRRIDLDALGLTADALPELLATAERMGFDGLNITHPCKQRVIEH LDELSADAAALGAVNTVCFAHGRRIGHNTDWSGFAKAFARGLPGASLERVVQLGAGGAGAAVAHAALTMGAAQLALFDVD PVRARSLADQLQARFPHARLSAGGTLADALANATGLIHATPTGMLGHPGLPLPAHLLRSGLWVADIVYFPLETELIRAAR ALGCRTLPGGGMAVYQAVDAFELFTGRAPDAERMFEHFRALVAR
Sequences:
>Translated_284_residues MSGRSFLIGLIGAGIGGSLSPAMHEAEGRRQGLNYVYRRIDLDALGLTADALPELLATAERMGFDGLNITHPCKQRVIEH LDELSADAAALGAVNTVCFAHGRRIGHNTDWSGFAKAFARGLPGASLERVVQLGAGGAGAAVAHAALTMGAAQLALFDVD PVRARSLADQLQARFPHARLSAGGTLADALANATGLIHATPTGMLGHPGLPLPAHLLRSGLWVADIVYFPLETELIRAAR ALGCRTLPGGGMAVYQAVDAFELFTGRAPDAERMFEHFRALVAR >Mature_283_residues SGRSFLIGLIGAGIGGSLSPAMHEAEGRRQGLNYVYRRIDLDALGLTADALPELLATAERMGFDGLNITHPCKQRVIEHL DELSADAAALGAVNTVCFAHGRRIGHNTDWSGFAKAFARGLPGASLERVVQLGAGGAGAAVAHAALTMGAAQLALFDVDP VRARSLADQLQARFPHARLSAGGTLADALANATGLIHATPTGMLGHPGLPLPAHLLRSGLWVADIVYFPLETELIRAARA LGCRTLPGGGMAVYQAVDAFELFTGRAPDAERMFEHFRALVAR
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=276, Percent_Identity=30.4347826086957, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1789675, Length=281, Percent_Identity=29.5373665480427, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320332, Length=270, Percent_Identity=24.4444444444444, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR013708 - InterPro: IPR022893 [H]
Pfam domain/function: PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 29784; Mature: 29652
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRSFLIGLIGAGIGGSLSPAMHEAEGRRQGLNYVYRRIDLDALGLTADALPELLATAE CCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHH RMGFDGLNITHPCKQRVIEHLDELSADAAALGAVNTVCFAHGRRIGHNTDWSGFAKAFAR HHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH GLPGASLERVVQLGAGGAGAAVAHAALTMGAAQLALFDVDPVRARSLADQLQARFPHARL CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCHHH SAGGTLADALANATGLIHATPTGMLGHPGLPLPAHLLRSGLWVADIVYFPLETELIRAAR CCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHH ALGCRTLPGGGMAVYQAVDAFELFTGRAPDAERMFEHFRALVAR HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SGRSFLIGLIGAGIGGSLSPAMHEAEGRRQGLNYVYRRIDLDALGLTADALPELLATAE CCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHH RMGFDGLNITHPCKQRVIEHLDELSADAAALGAVNTVCFAHGRRIGHNTDWSGFAKAFAR HHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH GLPGASLERVVQLGAGGAGAAVAHAALTMGAAQLALFDVDPVRARSLADQLQARFPHARL CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCHHH SAGGTLADALANATGLIHATPTGMLGHPGLPLPAHLLRSGLWVADIVYFPLETELIRAAR CCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHH ALGCRTLPGGGMAVYQAVDAFELFTGRAPDAERMFEHFRALVAR HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12692562; 11572948 [H]