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The map label for this gene is oxdD [H]

Identifier: 126447344

GI number: 126447344

Start: 1006554

End: 1007810

Strand: Direct

Name: oxdD [H]

Synonym: BMA10247_A1067

Alternate gene names: 126447344

Gene position: 1006554-1007810 (Clockwise)

Preceding gene: 126446241

Following gene: 126447874

Centisome position: 42.78

GC content: 67.14

Gene sequence:

>1257_bases
ATGACGAATCTGTCCCGACGCAAGATGCTCGCCGGCACGGCCGGCGCGCTCGCCGCCGCCGGCATCGCCGTTTCCGCGAA
GGCCGCTTCGTTCGGCAATCCGGACAGCCCGGCCGAGGGCGCGGTGAACGCGCGCAATCCGCAGAGCCTGACCGATCCGG
GGCCGCAAAATCCGGCGCTGATGAAGGAGTTTCCTTCGTTTCAGAGTCCGCCGGCCACCGACATTAACGGCATGCCGATT
TTCTGGGCGTCGTTCAATAATGCGCACAAGCGCATTCAGAACGGCGGCTGGGCGCGCGAAGTCACGCAGGAGGATTTCGC
GATTTCCGAAACGATTTCCGGCGTCAACATGCGGCTCGCGCGCGGCGGCATTCGCGAGATGCACTGGCACCAGCAGGCCG
AATGGGCGTTCATGCTCGACGGCCGCTGCCGGATCACCGTGCTCGATGAAGAGGGGCGGCCGTCCGTGCAGGACGTGAAG
ACGGGCGACCTCTGGTATTTCCCGCCGGGGCTGCCGCATTCGCTGCAGGGGCTCGGCGTCGACGGCGCCGAATTCCTCCT
CGCGTTCGACAACGGCCGCGCGTCCGAATTCAACACGCTGCTCGTGACGGACTGGATCGCGCACACGCCGCCCGACGTGC
TCGCGCTGAACTTCGGCGTGCCCGCCGATGCATTCCGCCGCATTCCGCTCGACAATCTGTGGATCTTCCAGGGCGACGAT
CCCGGGCCGCTCGCCGCCGCGCAGCGCGCGTCGGCGTCGTCGCGCGGCGCGCCGAAGCATCCGTTCATCTTCTCGATGGG
CGACATGAAGCCGAACGTGAAGACGCGCGGCGGCGAAGTGCGGATCGTCGACAGCACGAACTTCGCTGTGTCGAAGACGA
TCGCGGCCGCGCTCGTCACGGTGAAGCCGGGCGGCATGCGCGAGCTGCACTGGCACCCGAACGCGGACGAATGGCAGTAC
TACATCCGGGGCGACGCGCGCATGACGGTGTTCGACACCGGCCCGAAGGCGCAGACGGCCGATTTCCGCGCGGGCGACGT
CGGCTACGTGAAGAAGAGCCTCGGCCACTACGTGCAGAACACGGGCACGACCGATCTCGTGTTCCTCGAGATCTTCAAGG
CGGACCGCTACGCGGAGGTTTCGCTGTCCGACTGGCTCGCGCACACGCCGCCGCAGCTCGTCGAGGCGCATCTGCATATC
GCGCCCGACGTGATCGCGCGCTTTCCGCGCAACCGGCCGGACGTCGTGCCGGCGTAA

Upstream 100 bases:

>100_bases
GGTTTATATTTAACTTGCGTGGCGGGATATCGATTTTAGGAAAATCGAATCGATATTCCGGAGGGGTCGTTTTTTTATCG
AAACGTTCGAAGAGGTGAAT

Downstream 100 bases:

>100_bases
GCGCGCGGCGCGCGGGCGGCCTAACCGGCCGCCGCCCGGTCGCGCGGCCTGCCGCGCCGCGCATGTCCAATCATGCTGCA
CTCCAACGGATACCCACCAT

Product: oxalate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTNLSRRKMLAGTAGALAAAGIAVSAKAASFGNPDSPAEGAVNARNPQSLTDPGPQNPALMKEFPSFQSPPATDINGMPI
FWASFNNAHKRIQNGGWAREVTQEDFAISETISGVNMRLARGGIREMHWHQQAEWAFMLDGRCRITVLDEEGRPSVQDVK
TGDLWYFPPGLPHSLQGLGVDGAEFLLAFDNGRASEFNTLLVTDWIAHTPPDVLALNFGVPADAFRRIPLDNLWIFQGDD
PGPLAAAQRASASSRGAPKHPFIFSMGDMKPNVKTRGGEVRIVDSTNFAVSKTIAAALVTVKPGGMRELHWHPNADEWQY
YIRGDARMTVFDTGPKAQTADFRAGDVGYVKKSLGHYVQNTGTTDLVFLEIFKADRYAEVSLSDWLAHTPPQLVEAHLHI
APDVIARFPRNRPDVVPA

Sequences:

>Translated_418_residues
MTNLSRRKMLAGTAGALAAAGIAVSAKAASFGNPDSPAEGAVNARNPQSLTDPGPQNPALMKEFPSFQSPPATDINGMPI
FWASFNNAHKRIQNGGWAREVTQEDFAISETISGVNMRLARGGIREMHWHQQAEWAFMLDGRCRITVLDEEGRPSVQDVK
TGDLWYFPPGLPHSLQGLGVDGAEFLLAFDNGRASEFNTLLVTDWIAHTPPDVLALNFGVPADAFRRIPLDNLWIFQGDD
PGPLAAAQRASASSRGAPKHPFIFSMGDMKPNVKTRGGEVRIVDSTNFAVSKTIAAALVTVKPGGMRELHWHPNADEWQY
YIRGDARMTVFDTGPKAQTADFRAGDVGYVKKSLGHYVQNTGTTDLVFLEIFKADRYAEVSLSDWLAHTPPQLVEAHLHI
APDVIARFPRNRPDVVPA
>Mature_417_residues
TNLSRRKMLAGTAGALAAAGIAVSAKAASFGNPDSPAEGAVNARNPQSLTDPGPQNPALMKEFPSFQSPPATDINGMPIF
WASFNNAHKRIQNGGWAREVTQEDFAISETISGVNMRLARGGIREMHWHQQAEWAFMLDGRCRITVLDEEGRPSVQDVKT
GDLWYFPPGLPHSLQGLGVDGAEFLLAFDNGRASEFNTLLVTDWIAHTPPDVLALNFGVPADAFRRIPLDNLWIFQGDDP
GPLAAAQRASASSRGAPKHPFIFSMGDMKPNVKTRGGEVRIVDSTNFAVSKTIAAALVTVKPGGMRELHWHPNADEWQYY
IRGDARMTVFDTGPKAQTADFRAGDVGYVKKSLGHYVQNTGTTDLVFLEIFKADRYAEVSLSDWLAHTPPQLVEAHLHIA
PDVIARFPRNRPDVVPA

Specific function: Converts oxalate to formate and CO(2) [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 45630; Mature: 45499

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLSRRKMLAGTAGALAAAGIAVSAKAASFGNPDSPAEGAVNARNPQSLTDPGPQNPAL
CCCCHHHHHHHCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
MKEFPSFQSPPATDINGMPIFWASFNNAHKRIQNGGWAREVTQEDFAISETISGVNMRLA
HHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEH
RGGIREMHWHQQAEWAFMLDGRCRITVLDEEGRPSVQDVKTGDLWYFPPGLPHSLQGLGV
HCCHHHHHHCCCCCEEEEECCEEEEEEECCCCCCCHHCCCCCCEEEECCCCCCCCCCCCC
DGAEFLLAFDNGRASEFNTLLVTDWIAHTPPDVLALNFGVPADAFRRIPLDNLWIFQGDD
CCEEEEEEECCCCCCCCCEEEEEHHHHCCCCCEEEEECCCCHHHHHCCCCCCEEEEECCC
PGPLAAAQRASASSRGAPKHPFIFSMGDMKPNVKTRGGEVRIVDSTNFAVSKTIAAALVT
CCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHEEEEEEEE
VKPGGMRELHWHPNADEWQYYIRGDARMTVFDTGPKAQTADFRAGDVGYVKKSLGHYVQN
ECCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
TGTTDLVFLEIFKADRYAEVSLSDWLAHTPPQLVEAHLHIAPDVIARFPRNRPDVVPA
CCCCEEEEEEEECCCCEEEEEHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TNLSRRKMLAGTAGALAAAGIAVSAKAASFGNPDSPAEGAVNARNPQSLTDPGPQNPAL
CCCHHHHHHHCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
MKEFPSFQSPPATDINGMPIFWASFNNAHKRIQNGGWAREVTQEDFAISETISGVNMRLA
HHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEH
RGGIREMHWHQQAEWAFMLDGRCRITVLDEEGRPSVQDVKTGDLWYFPPGLPHSLQGLGV
HCCHHHHHHCCCCCEEEEECCEEEEEEECCCCCCCHHCCCCCCEEEECCCCCCCCCCCCC
DGAEFLLAFDNGRASEFNTLLVTDWIAHTPPDVLALNFGVPADAFRRIPLDNLWIFQGDD
CCEEEEEEECCCCCCCCCEEEEEHHHHCCCCCEEEEECCCCHHHHHCCCCCCEEEEECCC
PGPLAAAQRASASSRGAPKHPFIFSMGDMKPNVKTRGGEVRIVDSTNFAVSKTIAAALVT
CCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHEEEEEEEE
VKPGGMRELHWHPNADEWQYYIRGDARMTVFDTGPKAQTADFRAGDVGYVKKSLGHYVQN
ECCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
TGTTDLVFLEIFKADRYAEVSLSDWLAHTPPQLVEAHLHIAPDVIARFPRNRPDVVPA
CCCCEEEEEEEECCCCEEEEEHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11546787 [H]