Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447327
Identifier: 126447327
GI number: 126447327
Start: 979520
End: 980035
Strand: Reverse
Name: 126447327
Synonym: BMA10247_A1041
Alternate gene names: NA
Gene position: 980035-979520 (Counterclockwise)
Preceding gene: 126446823
Following gene: 126447626
Centisome position: 41.66
GC content: 71.71
Gene sequence:
>516_bases ATGGCGGTCGACGACGGGCTCGAAAAACAGGGCGAACGCACAGGCATGGCGGCGGACGATGCCTGCGGGCGAGCCGTCAC GATAAGCGAAATGCGGACGTTGCGCGAGCGCGGGCGTCGCATGTCGCGTCGCCGCGCGTTCGAAGCGCGCGCGGAAATCC ACGTCCGTCCCGGGCCGAGCGTATTGAAACAAGCGTTGCCGCGAGGTGACGTGCGCGATCCGGGTGTTGTCGAACACGAA TCGGCGCGCCGCTTCCGCCGCGCCGCTATCGCGGACGATCGCCGGCATCAGCGCCGCGCATCGCGCCGCGGGCGACAAGC GGCCCACGCTGCCTGCCGACTACGTCGAGCGCCGCGCGCCGTCGCGAACGAGCCCGATGCCGGTCGCGCGCCGGACAGCC GGCGCGCGCGGCGCACGATACCGGCATCGTTTCGCTGCGCACGCGCATGCGAACGCGCGGAAGCGATCCGCCGATCGCCA CCGGTCGCCTACCGGCCGCTCACTCGTCCCCGATGA
Upstream 100 bases:
>100_bases CCCCTGCGTCACGCAGAGCGCGTCGGCCGCGCGCGTGAAGCTGCGATGGCGCGCGACCGTCGCGAAGATCTGCAGGGCAT TCAAGGGCGGGAGGCGGCGC
Downstream 100 bases:
>100_bases CCGCGCGCGTGAGCACGCGGATGAGCGCCGCGCGCAGCGGCGCTTCGCGTGAGCGCACCGCGGCGACTCGCGCTCCGTGA ACCTTCCGGAAGCCGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAVDDGLEKQGERTGMAADDACGRAVTISEMRTLRERGRRMSRRRAFEARAEIHVRPGPSVLKQALPRGDVRDPGVVEHE SARRFRRAAIADDRRHQRRASRRGRQAAHAACRLRRAPRAVANEPDAGRAPDSRRARRTIPASFRCARACERAEAIRRSP PVAYRPLTRPR
Sequences:
>Translated_171_residues MAVDDGLEKQGERTGMAADDACGRAVTISEMRTLRERGRRMSRRRAFEARAEIHVRPGPSVLKQALPRGDVRDPGVVEHE SARRFRRAAIADDRRHQRRASRRGRQAAHAACRLRRAPRAVANEPDAGRAPDSRRARRTIPASFRCARACERAEAIRRSP PVAYRPLTRPR >Mature_170_residues AVDDGLEKQGERTGMAADDACGRAVTISEMRTLRERGRRMSRRRAFEARAEIHVRPGPSVLKQALPRGDVRDPGVVEHES ARRFRRAAIADDRRHQRRASRRGRQAAHAACRLRRAPRAVANEPDAGRAPDSRRARRTIPASFRCARACERAEAIRRSPP VAYRPLTRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19330; Mature: 19199
Theoretical pI: Translated: 12.25; Mature: 12.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDDGLEKQGERTGMAADDACGRAVTISEMRTLRERGRRMSRRRAFEARAEIHVRPGPS CCCCCCHHHHHHHCCCCCCHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH VLKQALPRGDVRDPGVVEHESARRFRRAAIADDRRHQRRASRRGRQAAHAACRLRRAPRA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VANEPDAGRAPDSRRARRTIPASFRCARACERAEAIRRSPPVAYRPLTRPR HCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AVDDGLEKQGERTGMAADDACGRAVTISEMRTLRERGRRMSRRRAFEARAEIHVRPGPS CCCCCHHHHHHHCCCCCCHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH VLKQALPRGDVRDPGVVEHESARRFRRAAIADDRRHQRRASRRGRQAAHAACRLRRAPRA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VANEPDAGRAPDSRRARRTIPASFRCARACERAEAIRRSPPVAYRPLTRPR HCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA