Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is czcC [H]

Identifier: 126447292

GI number: 126447292

Start: 1154640

End: 1156025

Strand: Reverse

Name: czcC [H]

Synonym: BMA10247_A1183

Alternate gene names: 126447292

Gene position: 1156025-1154640 (Counterclockwise)

Preceding gene: 126446040

Following gene: 126447709

Centisome position: 49.14

GC content: 74.39

Gene sequence:

>1386_bases
ATGCCCAAGCGTATCTTCGCCGCACTCGTGTCGGCCGCGATCGCGGCGTCGGCGGTGCAGGCGCAAGCGCAGCCCGCGCC
GGCCCCGTCCGCGCCCGACGGCCCGGCCGCCGCACCGCCGGACGCCCGCGCGGCCTCCGTCTCCGTCACGCCCGCCGTCT
CTCCCGCACCGATTTCGACTTCGACTGTGTCCGTCGCGCCGCCCGCGCTGTCGCTCGACGACGCACTGGCCCTAGCCGCA
GCGAACAACCCGCTGCTGAAAAGCGCGCGATCGAGCGCCGACGCATCCGTCGGCGCGCTCGTCCAGGCGGGCGCGCGTCC
GAATCCGACCGTGTCGTTCCTGCAGGAAGGGTTCGGGCGGCAGGAGCGCACGACGACCGCCGTCGTCAGCCAGCCGATCG
AGCTCGGCGGCAAGCGGCGCTCGCGCGTCGACGCCGCATCGTACGGCCGCGAATCCGCGCTCGCGTCGCTCGACGGCCGC
GCGGCCGCGCTGCGCGCCGACGTGACGGGCGCGTTCTACGGCGTGCTCGCCGCGCAGCGCCAGTTGCAGGTCGCCGACGA
ATCGGCCGCGATCGCCGCGCGCTCGGCCGACATGGCCGACAAGCGCGCCCGCGCGGGCAAGGTGTCGCCCGTCGAGGCGA
CGAAGGCGCGCGTCGCGCAGACGGCCGCGCAGATCGAGCTGTCGAACGCGCAAACGCGGGTGGCGGCGGCGCTCGCGCGG
CTCGCGAACGCGACAGGCAGCGCCGACGTGCGCGGGCGCGCCGCGTCGGGCGACCTCGACGCGTTGCCCGCCGCCGAGCC
GCTGCCGCAACTGCTCGGCCGGCTCGACGACGCGCCGCTCGCGCGCGCGGCGAAAGCCGACATGCTGCGCACGAACGCGC
AGATCGCGATCGAGCGCGCGAAGCGCGTGCCGGACATCACGGTGAGCGCGGGCGTCAAGCATGTCGTCACGGGCGGCGCG
CCGGACAACCAGGCGGTCGTCGGCATCTCGATTCCGCTGCCGCTCTTCGACACGAACAGGGGCGCGCTGCTCGAAGCCGT
CCACAACGCGGCGAAGGCAAGCGCCGATTTCGACGCCGAGCGCGCGCGGCTGCGGCTCGATCTCACCCAGGCCTATGCGA
ACTACGAGCGCGCGACGGGCGAGGCGCGGCGGCTGAAGGCCGACGTGCTGCCCGCCGCGCGGCAGTCGCTCGACGCGATG
TCGCGCGGCTACCAGCTCGGCAAGTTCGGCTTTCTCGACGTGCTCGACGCGCAGCGCACGCTGTTCGATGCGCAATCGCG
CTACGTGCAGGCGCTCGCCGACGCGCATCAGTCGTATGCGGACATCGAGCGCGTCGTCGGCGCGCCGGCGCGCGACGCTT
CCCGCCCCCTCGCCCAACTTCGCTGA

Upstream 100 bases:

>100_bases
GCCCGCCGCCGCGAACGTGACAAAAATGTCATGTTCGCCTCATGTTTGCATTGCGGCACGTCCGTAGCATCGATCGCGTT
TCACCGGAACTCGATCACTC

Downstream 100 bases:

>100_bases
AGAACTCGCCATGCAACGCAAGCCCCTGATTCTCGCCGGCGCGGCCGCGGCCGGCGCTCTCGCCATCGTGCTGGCGCTCG
CGCGCGCGCCGTCCACGTCG

Product: heavy metal resistance protein CzcC

Products: NA

Alternate protein names: Cation efflux system protein CzcC [H]

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MPKRIFAALVSAAIAASAVQAQAQPAPAPSAPDGPAAAPPDARAASVSVTPAVSPAPISTSTVSVAPPALSLDDALALAA
ANNPLLKSARSSADASVGALVQAGARPNPTVSFLQEGFGRQERTTTAVVSQPIELGGKRRSRVDAASYGRESALASLDGR
AAALRADVTGAFYGVLAAQRQLQVADESAAIAARSADMADKRARAGKVSPVEATKARVAQTAAQIELSNAQTRVAAALAR
LANATGSADVRGRAASGDLDALPAAEPLPQLLGRLDDAPLARAAKADMLRTNAQIAIERAKRVPDITVSAGVKHVVTGGA
PDNQAVVGISIPLPLFDTNRGALLEAVHNAAKASADFDAERARLRLDLTQAYANYERATGEARRLKADVLPAARQSLDAM
SRGYQLGKFGFLDVLDAQRTLFDAQSRYVQALADAHQSYADIERVVGAPARDASRPLAQLR

Sequences:

>Translated_461_residues
MPKRIFAALVSAAIAASAVQAQAQPAPAPSAPDGPAAAPPDARAASVSVTPAVSPAPISTSTVSVAPPALSLDDALALAA
ANNPLLKSARSSADASVGALVQAGARPNPTVSFLQEGFGRQERTTTAVVSQPIELGGKRRSRVDAASYGRESALASLDGR
AAALRADVTGAFYGVLAAQRQLQVADESAAIAARSADMADKRARAGKVSPVEATKARVAQTAAQIELSNAQTRVAAALAR
LANATGSADVRGRAASGDLDALPAAEPLPQLLGRLDDAPLARAAKADMLRTNAQIAIERAKRVPDITVSAGVKHVVTGGA
PDNQAVVGISIPLPLFDTNRGALLEAVHNAAKASADFDAERARLRLDLTQAYANYERATGEARRLKADVLPAARQSLDAM
SRGYQLGKFGFLDVLDAQRTLFDAQSRYVQALADAHQSYADIERVVGAPARDASRPLAQLR
>Mature_460_residues
PKRIFAALVSAAIAASAVQAQAQPAPAPSAPDGPAAAPPDARAASVSVTPAVSPAPISTSTVSVAPPALSLDDALALAAA
NNPLLKSARSSADASVGALVQAGARPNPTVSFLQEGFGRQERTTTAVVSQPIELGGKRRSRVDAASYGRESALASLDGRA
AALRADVTGAFYGVLAAQRQLQVADESAAIAARSADMADKRARAGKVSPVEATKARVAQTAAQIELSNAQTRVAAALARL
ANATGSADVRGRAASGDLDALPAAEPLPQLLGRLDDAPLARAAKADMLRTNAQIAIERAKRVPDITVSAGVKHVVTGGAP
DNQAVVGISIPLPLFDTNRGALLEAVHNAAKASADFDAERARLRLDLTQAYANYERATGEARRLKADVLPAARQSLDAMS
RGYQLGKFGFLDVLDAQRTLFDAQSRYVQALADAHQSYADIERVVGAPARDASRPLAQLR

Specific function: CzcC protein appears to modify the specificity of the system, perhaps by acting on the CzcB protein. When the CzcC protein is added to CzcA and CzcB, the efflux system gains specificity for cadmium and cobalt [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 47478; Mature: 47347

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRIFAALVSAAIAASAVQAQAQPAPAPSAPDGPAAAPPDARAASVSVTPAVSPAPIST
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
STVSVAPPALSLDDALALAAANNPLLKSARSSADASVGALVQAGARPNPTVSFLQEGFGR
CEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCC
QERTTTAVVSQPIELGGKRRSRVDAASYGRESALASLDGRAAALRADVTGAFYGVLAAQR
CHHHHHHHHHCHHHHCCCHHHHCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
QLQVADESAAIAARSADMADKRARAGKVSPVEATKARVAQTAAQIELSNAQTRVAAALAR
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHH
LANATGSADVRGRAASGDLDALPAAEPLPQLLGRLDDAPLARAAKADMLRTNAQIAIERA
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
KRVPDITVSAGVKHVVTGGAPDNQAVVGISIPLPLFDTNRGALLEAVHNAAKASADFDAE
HCCCCEEHHCCCCEEEECCCCCCCEEEEEEECCCCEECCCHHHHHHHHHHHHCCCCCCHH
RARLRLDLTQAYANYERATGEARRLKADVLPAARQSLDAMSRGYQLGKFGFLDVLDAQRT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LFDAQSRYVQALADAHQSYADIERVVGAPARDASRPLAQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHCC
>Mature Secondary Structure 
PKRIFAALVSAAIAASAVQAQAQPAPAPSAPDGPAAAPPDARAASVSVTPAVSPAPIST
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
STVSVAPPALSLDDALALAAANNPLLKSARSSADASVGALVQAGARPNPTVSFLQEGFGR
CEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCC
QERTTTAVVSQPIELGGKRRSRVDAASYGRESALASLDGRAAALRADVTGAFYGVLAAQR
CHHHHHHHHHCHHHHCCCHHHHCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
QLQVADESAAIAARSADMADKRARAGKVSPVEATKARVAQTAAQIELSNAQTRVAAALAR
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHH
LANATGSADVRGRAASGDLDALPAAEPLPQLLGRLDDAPLARAAKADMLRTNAQIAIERA
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
KRVPDITVSAGVKHVVTGGAPDNQAVVGISIPLPLFDTNRGALLEAVHNAAKASADFDAE
HCCCCEEHHCCCCEEEECCCCCCCEEEEEEECCCCEECCCHHHHHHHHHHHHCCCCCCHH
RARLRLDLTQAYANYERATGEARRLKADVLPAARQSLDAMSRGYQLGKFGFLDVLDAQRT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LFDAQSRYVQALADAHQSYADIERVVGAPARDASRPLAQLR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2678100; 7766206 [H]