Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is mii [H]
Identifier: 126447246
GI number: 126447246
Start: 2069113
End: 2070303
Strand: Reverse
Name: mii [H]
Synonym: BMA10247_A2140
Alternate gene names: 126447246
Gene position: 2070303-2069113 (Counterclockwise)
Preceding gene: 126445847
Following gene: 126446889
Centisome position: 88.0
GC content: 70.7
Gene sequence:
>1191_bases ATGGCCCACGTACCTCAAATCAAGATTCCCGCGACCTACCTGCGCGGCGGCACCAGCAAGGGCGTGTTCTTCCGGCTGCA GGATCTGCCCGAGGCCGCGCGAACGCCGGGCGCCGCGCGCGACGCGCTGCTCTCGCGCGTGATCGGCAGCCCCGACCCGT ACGGCAAGCAGATCGACGGCATGGGCGGCGCGAGCTCGAGCACGAGCAAGACGGTGATCGTCTCGAAGAGCGCGCGGCCC GATCACGACGTCGACTACCTGTTCGGTCAGGTGTCGATCGACAAGCCGTTCGTCGACTGGAGCGGCAACTGCGGCAACCT GTCGGCGGCCGTCGGCCCGTTCGCGATCGCGGGCGGCCTGATCGACCCGGCGCGCGTGCCGGAGAACGGCGTCGCGACCG TGCGGATCTGGCAGGCGAACATCGGCAAGACGATCGTCGCGCACGTGCCGATCACGAACGGCGCGGTGCAGGAGACGGGC GATTTCGAGCTCGACGGCGTGACGTTCCCGGCCGCCGAGGTGCAGCTCGAATTCATGGACCCGGCCGCCGACGAGGACGG CGCGGGCGGTGCGATGTTCCCGACGGGCAACCTCGTCGACGATCTCGACGTGCCGGGCGTCGGCACGCTGAAGGCGACGA TGATCAACGCGGGCATTCCGACGATCTTCGTCGACGCCGCGGCGATCGGCTACACCGGCACCGAGCTGCAGGACGCGATC AATTCGGACGCGAAGGCGCTCGCGATGTTCGAGACGATCCGCGCGCACGGCGCGCTGCGCATGGGCCTCATTGCGTCGCT CGACGAGATCGCGACGCGCCAGCACACGCCGAAGGTGGCGTTCGTCGCGAAGCCGGCGGATTACGTCGCGTCGAGCGGCA AGCGCGTCGCGGCGGCCGACGTCGACCTGCTCGTGCGCGCGCTATCGATGGGCAAGCTGCATCACGCGATGATGGGCACG GCGGCGGTGGCGATCGGCACCGCGGCGGCGATTCCGGGCACGCTCGTGAATCTCGCGGCGGGCGGCGGCGCGCGCCACGC GGTGCGCTTCGGCCATCCGTCGGGCACGCTGCGCGTCGGCGCGGAGGCGAAGCAGGACGGCGGCGAGTGGGTCGTCACGA AGGCGATCATGAGCCGCAGCGCGCGCGTGCTGATGGAGGGCTGGGTGCGCGTGCCGGGCGACGCGTTCTGA
Upstream 100 bases:
>100_bases CGTTCGCCGCCGAGGCGAACGGGCCCGGTTCACTTGCTTCGCATGAGACCGGAGCCGGCGCCGCGGCGCTGCCTCCGATC GATACAGGACCTCACGAACC
Downstream 100 bases:
>100_bases CGCCGCGGGCGCGGGGCGCGGCGATCGGGCGTGCGGCGGCCTTGCCGCCGCGTTATGCCTTTTCTTCGGCCGCGCCCGGC TCGCGCCCGTCGCCGACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: (R)-3-methylitaconate isomerase; 3-methylitaconate delta-isomerase [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAHVPQIKIPATYLRGGTSKGVFFRLQDLPEAARTPGAARDALLSRVIGSPDPYGKQIDGMGGASSSTSKTVIVSKSARP DHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGPFAIAGGLIDPARVPENGVATVRIWQANIGKTIVAHVPITNGAVQETG DFELDGVTFPAAEVQLEFMDPAADEDGAGGAMFPTGNLVDDLDVPGVGTLKATMINAGIPTIFVDAAAIGYTGTELQDAI NSDAKALAMFETIRAHGALRMGLIASLDEIATRQHTPKVAFVAKPADYVASSGKRVAAADVDLLVRALSMGKLHHAMMGT AAVAIGTAAAIPGTLVNLAAGGGARHAVRFGHPSGTLRVGAEAKQDGGEWVVTKAIMSRSARVLMEGWVRVPGDAF
Sequences:
>Translated_396_residues MAHVPQIKIPATYLRGGTSKGVFFRLQDLPEAARTPGAARDALLSRVIGSPDPYGKQIDGMGGASSSTSKTVIVSKSARP DHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGPFAIAGGLIDPARVPENGVATVRIWQANIGKTIVAHVPITNGAVQETG DFELDGVTFPAAEVQLEFMDPAADEDGAGGAMFPTGNLVDDLDVPGVGTLKATMINAGIPTIFVDAAAIGYTGTELQDAI NSDAKALAMFETIRAHGALRMGLIASLDEIATRQHTPKVAFVAKPADYVASSGKRVAAADVDLLVRALSMGKLHHAMMGT AAVAIGTAAAIPGTLVNLAAGGGARHAVRFGHPSGTLRVGAEAKQDGGEWVVTKAIMSRSARVLMEGWVRVPGDAF >Mature_395_residues AHVPQIKIPATYLRGGTSKGVFFRLQDLPEAARTPGAARDALLSRVIGSPDPYGKQIDGMGGASSSTSKTVIVSKSARPD HDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGPFAIAGGLIDPARVPENGVATVRIWQANIGKTIVAHVPITNGAVQETGD FELDGVTFPAAEVQLEFMDPAADEDGAGGAMFPTGNLVDDLDVPGVGTLKATMINAGIPTIFVDAAAIGYTGTELQDAIN SDAKALAMFETIRAHGALRMGLIASLDEIATRQHTPKVAFVAKPADYVASSGKRVAAADVDLLVRALSMGKLHHAMMGTA AVAIGTAAAIPGTLVNLAAGGGARHAVRFGHPSGTLRVGAEAKQDGGEWVVTKAIMSRSARVLMEGWVRVPGDAF
Specific function: Catalyzes the reversible isomerization of (R)-3- methylitaconate to 2,3-dimethylmaleate. Has very low isomerase activity with itaconate [H]
COG id: COG2828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786985, Length=385, Percent_Identity=33.5064935064935, Blast_Score=172, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007400 [H]
Pfam domain/function: PF04303 PrpF [H]
EC number: =5.3.3.6 [H]
Molecular weight: Translated: 40914; Mature: 40783
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVPQIKIPATYLRGGTSKGVFFRLQDLPEAARTPGAARDALLSRVIGSPDPYGKQIDG CCCCCCEECCHHHHCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC MGGASSSTSKTVIVSKSARPDHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGPFAIAGGL CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCC IDPARVPENGVATVRIWQANIGKTIVAHVPITNGAVQETGDFELDGVTFPAAEVQLEFMD CCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCEECCHHEEEEEEEC PAADEDGAGGAMFPTGNLVDDLDVPGVGTLKATMINAGIPTIFVDAAAIGYTGTELQDAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHCCCCCHHHHHHH NSDAKALAMFETIRAHGALRMGLIASLDEIATRQHTPKVAFVAKPADYVASSGKRVAAAD CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCEEEHHH VDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGARHAVRFGHPSGTLRVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCEEEECCCCCCEEEC AEAKQDGGEWVVTKAIMSRSARVLMEGWVRVPGDAF CCCCCCCCCEEEEHHHHHHHHHHHHHCCEECCCCCC >Mature Secondary Structure AHVPQIKIPATYLRGGTSKGVFFRLQDLPEAARTPGAARDALLSRVIGSPDPYGKQIDG CCCCCEECCHHHHCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC MGGASSSTSKTVIVSKSARPDHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGPFAIAGGL CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCC IDPARVPENGVATVRIWQANIGKTIVAHVPITNGAVQETGDFELDGVTFPAAEVQLEFMD CCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCEECCHHEEEEEEEC PAADEDGAGGAMFPTGNLVDDLDVPGVGTLKATMINAGIPTIFVDAAAIGYTGTELQDAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHCCCCCHHHHHHH NSDAKALAMFETIRAHGALRMGLIASLDEIATRQHTPKVAFVAKPADYVASSGKRVAAAD CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCEEEHHH VDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGARHAVRFGHPSGTLRVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCEEEECCCCCCEEEC AEAKQDGGEWVVTKAIMSRSARVLMEGWVRVPGDAF CCCCCCCCCEEEEHHHHHHHHHHHHHCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA