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The map label for this gene is psd [H]

Identifier: 126447221

GI number: 126447221

Start: 2216328

End: 2217629

Strand: Reverse

Name: psd [H]

Synonym: BMA10247_A2283

Alternate gene names: 126447221

Gene position: 2217629-2216328 (Counterclockwise)

Preceding gene: 126446692

Following gene: 126447127

Centisome position: 94.26

GC content: 68.66

Gene sequence:

>1302_bases
ATGACGAACCGAACGAACGCAACCCACGCGACGAACGCGACGAACGCGACAAATGCCGCCCGTGAGGCGTCCGCCGAGCG
CCGACGCCTAGGCGGATGGCTGCCCGCCGAGGAGGCGGCGCTCGCGCGCTATCGGAAGACGCTCGCCGCGCATGCGCGCG
AGCACGCGGACGGCGCGCCGATGACGGAGGCGGTGCGCGAGCTCGCGGCGCTCGCCGAAGGCGAGCCGCCGCTGCGCATG
GCGCTGACGCGCGCGATCGACGAGGCGCGCTCGCGCGGCTACGAGCTCGGCTACGAGACGATCGGCGAACTGATGACGGT
GATCGATTTCGTGATGACGTACGCGCCGCCGTTCAGCGAATCCGGGCTCGTGGTCTGCCCGCTGAACGCGCTGCTCGACT
GGCCGCTTTGCATGCCGTCCGGCTACGCGTTCTTTCGCGACCGCGCGGTGAACGCGCAACTCAAGCGCGTGCTGAACGTA
TGGTGCGGCTTTCTGGGCGGCCCGCATTCGCGCGCGCACCTGAACGCGTCGGAGCCGGACGGCTGGTTCAGCGCGGAGGC
CGTGAAGCGGATCGGCATGTCGCAGTTCCATTGCGATCCGCAACTGCCTTACTGGGGCTTCGCCTCGTGGAACGATTTCT
TCACGCGGCGCTTTCTGCCCGACGCGCGGCCCGTCGCGGCGCCGGACGATCCGGCCGTGATCGTCAGCGCATGCGAGGCC
GCGCCGTATCACGTCGCGCACGATCTGAAGCTGCTCGACACGTTCTGGATCAAGTCGCAGCCGTATTCGCTGCGCGACAT
CTTCACCGCGGCGCGCGGCGAGCTCGCGCGCGGCTTCGTCGGCGGCTCGCTGTACCAGGCGTTCCTGAGCGCCTACGATT
ATCACCGCTGGCATGCGCCCGTCGCGGGGCGCATCGCGCACGCGTATCTCGTCGACGGCACCTACTATTCGAGCACCGAG
GCCGAAGGCGCGGACCCGGCCGGGCTCAACGATTCGCAGGGCTACATGACGGCCGTCGCGACGCGCGCGGTGATCGTCAT
CGATGCCGATGCGCCGGAGATCGGCCGCGTCGCATGCGTGTTCGTCGGGATGGGCGAAGTGTCGTCGTGCATGATCGACG
CGCTGCCCGGGCAGCATGTCGAGAAGGGCGAGGAAATCGGCTACTTCCAGTACGGCGGCTCGACATACTGCATGCTCTTC
GAGCCGGGCGTGATCGGCAGCTTCGTCGCGCATCCGCGTTATCACGAAGGCGCGCCGGCCGTGCAGGTGAACGCGGAAGT
GGCGGCCGTCGCGGCGAAGTGA

Upstream 100 bases:

>100_bases
GCCGACCGGAGCCGGCGCTTCGCTCGATGTTCGCTTTCGCGAAGCTTGCCTTTCCGTCTCGCCCATCGCCTCGCGTCACC
CGATCGAATGGAGGGCCGAC

Downstream 100 bases:

>100_bases
GCGGCGGCGGCAACGACAAGAGCAACGGGAACGGCGCGGCGTGCCGTTCCCGCCGCGCGCACGGCAGCGCATGCGCGGCC
TGTCGTGCGCGACTCGCGCC

Product: putative phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTNRTNATHATNATNATNAAREASAERRRLGGWLPAEEAALARYRKTLAAHAREHADGAPMTEAVRELAALAEGEPPLRM
ALTRAIDEARSRGYELGYETIGELMTVIDFVMTYAPPFSESGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNV
WCGFLGGPHSRAHLNASEPDGWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVAAPDDPAVIVSACEA
APYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAPVAGRIAHAYLVDGTYYSSTE
AEGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACVFVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLF
EPGVIGSFVAHPRYHEGAPAVQVNAEVAAVAAK

Sequences:

>Translated_433_residues
MTNRTNATHATNATNATNAAREASAERRRLGGWLPAEEAALARYRKTLAAHAREHADGAPMTEAVRELAALAEGEPPLRM
ALTRAIDEARSRGYELGYETIGELMTVIDFVMTYAPPFSESGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNV
WCGFLGGPHSRAHLNASEPDGWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVAAPDDPAVIVSACEA
APYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAPVAGRIAHAYLVDGTYYSSTE
AEGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACVFVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLF
EPGVIGSFVAHPRYHEGAPAVQVNAEVAAVAAK
>Mature_432_residues
TNRTNATHATNATNATNAAREASAERRRLGGWLPAEEAALARYRKTLAAHAREHADGAPMTEAVRELAALAEGEPPLRMA
LTRAIDEARSRGYELGYETIGELMTVIDFVMTYAPPFSESGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNVW
CGFLGGPHSRAHLNASEPDGWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVAAPDDPAVIVSACEAA
PYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAPVAGRIAHAYLVDGTYYSSTEA
EGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACVFVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLFE
PGVIGSFVAHPRYHEGAPAVQVNAEVAAVAAK

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 2 subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321609, Length=194, Percent_Identity=24.2268041237113, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR005221 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 47118; Mature: 46986

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRTNATHATNATNATNAAREASAERRRLGGWLPAEEAALARYRKTLAAHAREHADGAP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
MTEAVRELAALAEGEPPLRMALTRAIDEARSRGYELGYETIGELMTVIDFVMTYAPPFSE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
SGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNVWCGFLGGPHSRAHLNASEPD
CCEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVAAPDDPAVIVSACEA
CCCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
APYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAP
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VAGRIAHAYLVDGTYYSSTEAEGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACV
HHHHEEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHEEECEEEEEEECCCCCCCCEEEE
FVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLFEPGVIGSFVAHPRYHEGAPA
EEECCCHHHHHHHCCCCCHHCCCCCCCEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCE
VQVNAEVAAVAAK
EEECCEEEEEECC
>Mature Secondary Structure 
TNRTNATHATNATNATNAAREASAERRRLGGWLPAEEAALARYRKTLAAHAREHADGAP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
MTEAVRELAALAEGEPPLRMALTRAIDEARSRGYELGYETIGELMTVIDFVMTYAPPFSE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
SGLVVCPLNALLDWPLCMPSGYAFFRDRAVNAQLKRVLNVWCGFLGGPHSRAHLNASEPD
CCEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GWFSAEAVKRIGMSQFHCDPQLPYWGFASWNDFFTRRFLPDARPVAAPDDPAVIVSACEA
CCCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
APYHVAHDLKLLDTFWIKSQPYSLRDIFTAARGELARGFVGGSLYQAFLSAYDYHRWHAP
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VAGRIAHAYLVDGTYYSSTEAEGADPAGLNDSQGYMTAVATRAVIVIDADAPEIGRVACV
HHHHEEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHEEECEEEEEEECCCCCCCCEEEE
FVGMGEVSSCMIDALPGQHVEKGEEIGYFQYGGSTYCMLFEPGVIGSFVAHPRYHEGAPA
EEECCCHHHHHHHCCCCCHHCCCCCCCEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCE
VQVNAEVAAVAAK
EEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA