Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is quiP [H]
Identifier: 126447177
GI number: 126447177
Start: 2084979
End: 2087492
Strand: Reverse
Name: quiP [H]
Synonym: BMA10247_A2152
Alternate gene names: 126447177
Gene position: 2087492-2084979 (Counterclockwise)
Preceding gene: 126446663
Following gene: 262192849
Centisome position: 88.73
GC content: 70.96
Gene sequence:
>2514_bases ATGTCGATTCGCCACGCGACGCGTAGCGTCGCGCTCTGCTCGATGCTCGCGCTGGCGTCGACGCTGGGCTGCACGTCCGG CGCGCACGACGCGCCCGCCGCCCACGCGCCCCGTACGGCGCAAACCGCCCATGCCACCGCGGTCGCAGCCGGCATCGCGG GATTGCGCGAGCCGGTGCGCATCGTGAGGGACAGCGTCGGCGTCTCGCACATCTACGCGCGCAACACGCACGATCTGTTT TTCGCGCAAGGTTACAACGCGGCGCGCGATCGGCTCTGGCAGCTCGATCTGTGGCGCAGGCAGGGCGAGGGGAAGATGGC CGAGCAATTCGGCCCGCGCTTCGCCGCGCAGGATCGCGCGGCGCGGCTCTTTCTCTATCGCGGCGATCTGGAGGCCGAGT ATGCGAGCTATCACCCGGAAGCCAAGCAGATCCTGCAGGCGTTCGCCGACGGCATCAACGCATACGTGCGCGAGGCGAAG GCCGATCCCGCGAAGATGCCGCCCGAGTTCCGGCTGACGGGCGCCGAGCCGGGCGAATGGCGGCCCGAATCGTCGCTGAT CCGGATCTACGGGATCACGCGCAACGTGACGGGCGAGGTCGCGCTCGCGCGGCAGGTGGCCGCCGTCGGGCTGAGCAAGG CGCTTTCGCTGAATGCGTTCGAGCCGCCGGTGCGGCAGACGGCGATCCCGGCGGGTGTCGACGTCGGCCTGATCGACAAG CGGATCCTCGCCGACTATCTGCTCGCGCGCAACGGCCTGCCGTTCCGCGCGGAAGACTTCCCGCGCAGCCCGCTCGGCGC GGCGCAGCGCGACGCGCTCGCCGCGCGCCTGAACGCGGCGCGGCTCACGCTCGCCGACGATTCGGCGAATCCGCTCGCGC CGCGCTACGAGAGCAACAACTGGGTGGTCGCGGGCGCGCGCACGGCGAGCGGCAAGCCGCTTTTCGCGAACGATCCGCAC CGGCGCATCGGCATGCCTTCGCTGCGCTACATGGTGCATCTGCACGCGCCCGGCTGGAACGTGATCGGCGCGGGCGAGCC CGCGCTGCCCGGCGTGTCGGTCGGGCACAACGATCGCGTCGCGTTCGGCCTGACGATCTTCGCGTTCGGTGACGAAGAGG ATCTGTACGTGTACGACACCCGGCCGGGCCACCCCGACGAATACCGCTATCGCGGCCGGTGGGAAAAGATGCGCATCGTC GAGGAGACCGTCGCCGTGCGCGGGCAGGCGAATCGGGTCGAACGGCTCGCGTTCACGCGGCACGGGCCGGTGCTGTACGA GGACGCCGCGCATCGCAAGGCGTATGCGCTGCGCGCCGCGTACCTCGAATTTCCGGGCACGGCCGCGTATCTCGCGAGCC TGCGGCTCGACCAGGCGCGCGACTGGCCGAGCTTCGTCGCGGGCATGCGCCGGCATTACGTGCCGGGCGAGAACATGGTC TATGCGGATGTCGACGGCAACATCGGCTGGTTCGGCGGCGCGCTCGCGCCGATCCGGCGCGAGGCCGACTGGTCCGGCGC GCTGCCGGTGCCGGGCGACGGCCGCTACGAATGGGCGGGGCTGACGGAGGGCGAAGCGCTGCCGCACGTGCTGAATCCGG CCGCCGGCTATATCGCCACCGCGAACGCCTATGATTTGCCGGACGGCTACCGCTACGTCGATCGGTCCGCGCATGTGTGG GCCGAGCCGTTCCGGCAGCGGCGCCTCGACGAGGTGCTGCGCGGCGCGAGCGGGCTGACGGTCGCGGACATGCAGCGGTT GCAGTACGACGACCGGTCGCTGCCCGCGCAGGCGATGCTCGGATTCGCGTCGCAACTGAAGGCGGACGAGCCGGGCACGC GCGACGCGCTCGCGCGCCTCGCCCGCTGGAGCGGCGACATGGCGATCGACTCGGTGCCCGCGACCATCTATGAATTCTGG ATGCGCGAGGTGATGCGCCGCGTGCGCGATGTCGAGGTGCCGGCCGCCGCACGCGACGCATTCCCGAAGCTCGAGGTGCG GCAGGTGCTGCGCTATCTGCGGCAGCCGGACGGCGCGTTCGGCGCGGATCCGGTTGCGGGCCGCGACGCGCTGCTGCTCG CCGCGTTGCGCGACGGGCTGGCGAACGCGCGCGCGAAGCTCGGCGAGAACGTCGACGCATGGCGATGGGGCCGGCTGCAT CACGCGCAGTTCGATCATCAACTGGCGGGCGTGCTGCCGGCGTTCGGCGCGTTCGGCACCGAACGCTACGCGGTGGGCGG CAACGACGACACCGTGCATCGCGGCACGTATCGGCCGTCCGACTTCCGGCAGACGAGCGGCGCGTCGTACCGGCAGGTGA TCGACGTCGCGGACTGGGATCGCTCGATGATCCAGAACACGCCGGGGCAATCGGGCGATCCGCGCAGCCCGTTCCATGCG AACCTGCTGAAAGGCTGGGCGAGCGGCGAATACTGGCCGATGGCGTTCAGCGATCGCGCTGTGGACGCGCTCGCGCACGA CACGCTGATACTGGAGCCGGCGCCCGCGCGGTGA
Upstream 100 bases:
>100_bases CAGACGCCGACGCACATGCACATGCACATGCACATGCACATGCGCGCGCATCGCCGCCGCGGTCGCGCGCCCCGCCCTGT TTCCAATGGAGGAGAACGCC
Downstream 100 bases:
>100_bases GCGGCGTCGTCCGGTGCGCGCGGCGTTCGCCACGCATGCGCGCGCGCGTCGAGCCGGCGCCCGCGCGCGCAAGCATTCAT GCATGCATCCATGCGTCGAT
Product: putative penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MSIRHATRSVALCSMLALASTLGCTSGAHDAPAAHAPRTAQTAHATAVAAGIAGLREPVRIVRDSVGVSHIYARNTHDLF FAQGYNAARDRLWQLDLWRRQGEGKMAEQFGPRFAAQDRAARLFLYRGDLEAEYASYHPEAKQILQAFADGINAYVREAK ADPAKMPPEFRLTGAEPGEWRPESSLIRIYGITRNVTGEVALARQVAAVGLSKALSLNAFEPPVRQTAIPAGVDVGLIDK RILADYLLARNGLPFRAEDFPRSPLGAAQRDALAARLNAARLTLADDSANPLAPRYESNNWVVAGARTASGKPLFANDPH RRIGMPSLRYMVHLHAPGWNVIGAGEPALPGVSVGHNDRVAFGLTIFAFGDEEDLYVYDTRPGHPDEYRYRGRWEKMRIV EETVAVRGQANRVERLAFTRHGPVLYEDAAHRKAYALRAAYLEFPGTAAYLASLRLDQARDWPSFVAGMRRHYVPGENMV YADVDGNIGWFGGALAPIRREADWSGALPVPGDGRYEWAGLTEGEALPHVLNPAAGYIATANAYDLPDGYRYVDRSAHVW AEPFRQRRLDEVLRGASGLTVADMQRLQYDDRSLPAQAMLGFASQLKADEPGTRDALARLARWSGDMAIDSVPATIYEFW MREVMRRVRDVEVPAAARDAFPKLEVRQVLRYLRQPDGAFGADPVAGRDALLLAALRDGLANARAKLGENVDAWRWGRLH HAQFDHQLAGVLPAFGAFGTERYAVGGNDDTVHRGTYRPSDFRQTSGASYRQVIDVADWDRSMIQNTPGQSGDPRSPFHA NLLKGWASGEYWPMAFSDRAVDALAHDTLILEPAPAR
Sequences:
>Translated_837_residues MSIRHATRSVALCSMLALASTLGCTSGAHDAPAAHAPRTAQTAHATAVAAGIAGLREPVRIVRDSVGVSHIYARNTHDLF FAQGYNAARDRLWQLDLWRRQGEGKMAEQFGPRFAAQDRAARLFLYRGDLEAEYASYHPEAKQILQAFADGINAYVREAK ADPAKMPPEFRLTGAEPGEWRPESSLIRIYGITRNVTGEVALARQVAAVGLSKALSLNAFEPPVRQTAIPAGVDVGLIDK RILADYLLARNGLPFRAEDFPRSPLGAAQRDALAARLNAARLTLADDSANPLAPRYESNNWVVAGARTASGKPLFANDPH RRIGMPSLRYMVHLHAPGWNVIGAGEPALPGVSVGHNDRVAFGLTIFAFGDEEDLYVYDTRPGHPDEYRYRGRWEKMRIV EETVAVRGQANRVERLAFTRHGPVLYEDAAHRKAYALRAAYLEFPGTAAYLASLRLDQARDWPSFVAGMRRHYVPGENMV YADVDGNIGWFGGALAPIRREADWSGALPVPGDGRYEWAGLTEGEALPHVLNPAAGYIATANAYDLPDGYRYVDRSAHVW AEPFRQRRLDEVLRGASGLTVADMQRLQYDDRSLPAQAMLGFASQLKADEPGTRDALARLARWSGDMAIDSVPATIYEFW MREVMRRVRDVEVPAAARDAFPKLEVRQVLRYLRQPDGAFGADPVAGRDALLLAALRDGLANARAKLGENVDAWRWGRLH HAQFDHQLAGVLPAFGAFGTERYAVGGNDDTVHRGTYRPSDFRQTSGASYRQVIDVADWDRSMIQNTPGQSGDPRSPFHA NLLKGWASGEYWPMAFSDRAVDALAHDTLILEPAPAR >Mature_836_residues SIRHATRSVALCSMLALASTLGCTSGAHDAPAAHAPRTAQTAHATAVAAGIAGLREPVRIVRDSVGVSHIYARNTHDLFF AQGYNAARDRLWQLDLWRRQGEGKMAEQFGPRFAAQDRAARLFLYRGDLEAEYASYHPEAKQILQAFADGINAYVREAKA DPAKMPPEFRLTGAEPGEWRPESSLIRIYGITRNVTGEVALARQVAAVGLSKALSLNAFEPPVRQTAIPAGVDVGLIDKR ILADYLLARNGLPFRAEDFPRSPLGAAQRDALAARLNAARLTLADDSANPLAPRYESNNWVVAGARTASGKPLFANDPHR RIGMPSLRYMVHLHAPGWNVIGAGEPALPGVSVGHNDRVAFGLTIFAFGDEEDLYVYDTRPGHPDEYRYRGRWEKMRIVE ETVAVRGQANRVERLAFTRHGPVLYEDAAHRKAYALRAAYLEFPGTAAYLASLRLDQARDWPSFVAGMRRHYVPGENMVY ADVDGNIGWFGGALAPIRREADWSGALPVPGDGRYEWAGLTEGEALPHVLNPAAGYIATANAYDLPDGYRYVDRSAHVWA EPFRQRRLDEVLRGASGLTVADMQRLQYDDRSLPAQAMLGFASQLKADEPGTRDALARLARWSGDMAIDSVPATIYEFWM REVMRRVRDVEVPAAARDAFPKLEVRQVLRYLRQPDGAFGADPVAGRDALLLAALRDGLANARAKLGENVDAWRWGRLHH AQFDHQLAGVLPAFGAFGTERYAVGGNDDTVHRGTYRPSDFRQTSGASYRQVIDVADWDRSMIQNTPGQSGDPRSPFHAN LLKGWASGEYWPMAFSDRAVDALAHDTLILEPAPAR
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 92178; Mature: 92047
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRHATRSVALCSMLALASTLGCTSGAHDAPAAHAPRTAQTAHATAVAAGIAGLREPVR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IVRDSVGVSHIYARNTHDLFFAQGYNAARDRLWQLDLWRRQGEGKMAEQFGPRFAAQDRA HHHHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHCCCC ARLFLYRGDLEAEYASYHPEAKQILQAFADGINAYVREAKADPAKMPPEFRLTGAEPGEW EEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC RPESSLIRIYGITRNVTGEVALARQVAAVGLSKALSLNAFEPPVRQTAIPAGVDVGLIDK CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHH RILADYLLARNGLPFRAEDFPRSPLGAAQRDALAARLNAARLTLADDSANPLAPRYESNN HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC WVVAGARTASGKPLFANDPHRRIGMPSLRYMVHLHAPGWNVIGAGEPALPGVSVGHNDRV EEEEECCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCE AFGLTIFAFGDEEDLYVYDTRPGHPDEYRYRGRWEKMRIVEETVAVRGQANRVERLAFTR EEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHC HGPVLYEDAAHRKAYALRAAYLEFPGTAAYLASLRLDQARDWPSFVAGMRRHYVPGENMV CCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEE YADVDGNIGWFGGALAPIRREADWSGALPVPGDGRYEWAGLTEGEALPHVLNPAAGYIAT EEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCEEE ANAYDLPDGYRYVDRSAHVWAEPFRQRRLDEVLRGASGLTVADMQRLQYDDRSLPAQAML CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHH GFASQLKADEPGTRDALARLARWSGDMAIDSVPATIYEFWMREVMRRVRDVEVPAAARDA HHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHC FPKLEVRQVLRYLRQPDGAFGADPVAGRDALLLAALRDGLANARAKLGENVDAWRWGRLH CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHH HAQFDHQLAGVLPAFGAFGTERYAVGGNDDTVHRGTYRPSDFRQTSGASYRQVIDVADWD HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCHHHHCCCCCHHHHHHHHHHH RSMIQNTPGQSGDPRSPFHANLLKGWASGEYWPMAFSDRAVDALAHDTLILEPAPAR HHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCC >Mature Secondary Structure SIRHATRSVALCSMLALASTLGCTSGAHDAPAAHAPRTAQTAHATAVAAGIAGLREPVR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IVRDSVGVSHIYARNTHDLFFAQGYNAARDRLWQLDLWRRQGEGKMAEQFGPRFAAQDRA HHHHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHCCCC ARLFLYRGDLEAEYASYHPEAKQILQAFADGINAYVREAKADPAKMPPEFRLTGAEPGEW EEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC RPESSLIRIYGITRNVTGEVALARQVAAVGLSKALSLNAFEPPVRQTAIPAGVDVGLIDK CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHH RILADYLLARNGLPFRAEDFPRSPLGAAQRDALAARLNAARLTLADDSANPLAPRYESNN HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC WVVAGARTASGKPLFANDPHRRIGMPSLRYMVHLHAPGWNVIGAGEPALPGVSVGHNDRV EEEEECCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCE AFGLTIFAFGDEEDLYVYDTRPGHPDEYRYRGRWEKMRIVEETVAVRGQANRVERLAFTR EEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHC HGPVLYEDAAHRKAYALRAAYLEFPGTAAYLASLRLDQARDWPSFVAGMRRHYVPGENMV CCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEE YADVDGNIGWFGGALAPIRREADWSGALPVPGDGRYEWAGLTEGEALPHVLNPAAGYIAT EEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCEEE ANAYDLPDGYRYVDRSAHVWAEPFRQRRLDEVLRGASGLTVADMQRLQYDDRSLPAQAML CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHH GFASQLKADEPGTRDALARLARWSGDMAIDSVPATIYEFWMREVMRRVRDVEVPAAARDA HHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHC FPKLEVRQVLRYLRQPDGAFGADPVAGRDALLLAALRDGLANARAKLGENVDAWRWGRLH CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHH HAQFDHQLAGVLPAFGAFGTERYAVGGNDDTVHRGTYRPSDFRQTSGASYRQVIDVADWD HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCHHHHCCCCCHHHHHHHHHHH RSMIQNTPGQSGDPRSPFHANLLKGWASGEYWPMAFSDRAVDALAHDTLILEPAPAR HHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]