| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is bpsI [H]
Identifier: 126446861
GI number: 126446861
Start: 909541
End: 910152
Strand: Reverse
Name: bpsI [H]
Synonym: BMA10247_A0960
Alternate gene names: 126446861
Gene position: 910152-909541 (Counterclockwise)
Preceding gene: 126447404
Following gene: 126445872
Centisome position: 38.69
GC content: 69.12
Gene sequence:
>612_bases ATGCGAACTTTCGTTCATGGCGACGGGCGCCTGCCGAGCGACTTGGCGGCTGATCTGGGCCTTTATCGGCACGGAGTTTT CGTCGAGCAGCTCGGCTGGAAACTGCCGTCGGCAAGCGAAGGGTTCGAGCGGGATCAGTACGATCGCGACGATACCGTCT ATGTGTTCGCCCGCGACGACGACGGGGAAATCTGCGGCTGCGCCCGGCTGCTGCCGACGACCCGCCCGTATCTGCTGAAG GAACTGTTCCCGACGCTGGTCGCGCAAGACATGCCGTTGCCGCAATCCGCCGCCGTCTGGGAATTGTCGCGCTTCGCCGC GAACGCCGAGGATCCGGCCGGGGGCGGCAACCCGGCCTGGGCGGTGCGGCCGATGCTCGCCGCCGTCGTCGAGTGCGCCG CGCGGCTTGGCGCGAAGCAACTGATCGGCGTGACGTTTCTGAGCATGGAGCGCCTGTTCCGCCGGATCGGCGTGCACGCG CACCGGGCGGGGCCCGCGCAGCAGATCGACGGGCGCATGGTCGTCGCGTGCTGGATCGACCTCGACGCGCAAACGCTCGC CGCGCTCGATCTCGACCCGCTGCTGTGCGCGCCGCCCGCCGAAGCCGCCTGA
Upstream 100 bases:
>100_bases CACCAGCCCCGCTTTCCCGACCCTGTAAGGGTTAACAGTTACCTGTCCTCGGAGCGCGCGATGTAATGCGCCCATTCCAA AGCACACGCACGAGGACGAC
Downstream 100 bases:
>100_bases GCGCGCCCGGTCGCCCCGCTTCGGGGCCGCGCCGTTCGTCATTCAAGGAGACCTCTACACCGTGGACCATTCAACGGTAT TTCGCGCGATGCTCCCTACG
Product: autoinducer synthase BpsI
Products: NA
Alternate protein names: Autoinducer synthesis protein solI [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MRTFVHGDGRLPSDLAADLGLYRHGVFVEQLGWKLPSASEGFERDQYDRDDTVYVFARDDDGEICGCARLLPTTRPYLLK ELFPTLVAQDMPLPQSAAVWELSRFAANAEDPAGGGNPAWAVRPMLAAVVECAARLGAKQLIGVTFLSMERLFRRIGVHA HRAGPAQQIDGRMVVACWIDLDAQTLAALDLDPLLCAPPAEAA
Sequences:
>Translated_203_residues MRTFVHGDGRLPSDLAADLGLYRHGVFVEQLGWKLPSASEGFERDQYDRDDTVYVFARDDDGEICGCARLLPTTRPYLLK ELFPTLVAQDMPLPQSAAVWELSRFAANAEDPAGGGNPAWAVRPMLAAVVECAARLGAKQLIGVTFLSMERLFRRIGVHA HRAGPAQQIDGRMVVACWIDLDAQTLAALDLDPLLCAPPAEAA >Mature_203_residues MRTFVHGDGRLPSDLAADLGLYRHGVFVEQLGWKLPSASEGFERDQYDRDDTVYVFARDDDGEICGCARLLPTTRPYLLK ELFPTLVAQDMPLPQSAAVWELSRFAANAEDPAGGGNPAWAVRPMLAAVVECAARLGAKQLIGVTFLSMERLFRRIGVHA HRAGPAQQIDGRMVVACWIDLDAQTLAALDLDPLLCAPPAEAA
Specific function: Required for the synthesis of acyl-HSL autoinducers that bind to solR [H]
COG id: COG3916
COG function: function code TQ; N-acyl-L-homoserine lactone synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autoinducer synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR001690 - InterPro: IPR018311 [H]
Pfam domain/function: PF00765 Autoind_synth [H]
EC number: =2.3.1.184 [H]
Molecular weight: Translated: 22116; Mature: 22116
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00949 AUTOINDUCERS_SYNTH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFVHGDGRLPSDLAADLGLYRHGVFVEQLGWKLPSASEGFERDQYDRDDTVYVFARDD CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECC DGEICGCARLLPTTRPYLLKELFPTLVAQDMPLPQSAAVWELSRFAANAEDPAGGGNPAW CCCEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCH AVRPMLAAVVECAARLGAKQLIGVTFLSMERLFRRIGVHAHRAGPAQQIDGRMVVACWID HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEEE LDAQTLAALDLDPLLCAPPAEAA CCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRTFVHGDGRLPSDLAADLGLYRHGVFVEQLGWKLPSASEGFERDQYDRDDTVYVFARDD CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECC DGEICGCARLLPTTRPYLLKELFPTLVAQDMPLPQSAAVWELSRFAANAEDPAGGGNPAW CCCEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCH AVRPMLAAVVECAARLGAKQLIGVTFLSMERLFRRIGVHAHRAGPAQQIDGRMVVACWID HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEEE LDAQTLAALDLDPLLCAPPAEAA CCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371457 [H]