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The map label for this gene is soxA [H]

Identifier: 126446845

GI number: 126446845

Start: 810934

End: 812352

Strand: Direct

Name: soxA [H]

Synonym: BMA10247_A0857

Alternate gene names: 126446845

Gene position: 810934-812352 (Clockwise)

Preceding gene: 126446455

Following gene: 126447867

Centisome position: 34.47

GC content: 68.43

Gene sequence:

>1419_bases
GTGGTGAAACCGCAGGCGCGCGCGATGACGAACAAAAAGATCCTGCTGAACGCGTTCGACATGAATTGCGTCGGCCATAT
CAATCACGGCTTGTGGACCCACCCGCGCGACCGCTCCGCGCAGTACACCGATCTCGACTACTGGTCCGATCTCGCGCGCA
CGCTCGAGCGCGGCAAGTTCGACGCGATCTTTCTCGCGGATATCGTCGGCGTCTACGACGTGTACGGCGGCGGCCCCGAT
CTCGCGCTGCGCGAATCGGTGCAGGTGCCCGTCAACGATCCGCTGCTGCTCGTGCCGGCGATGGCGCAGGTGACGAAGCA
CCTCGGCTTCGGCGTGACCGCGAACCTGACGTACGAGCCGCCGTACCTGTTCGCGCGGCGGATGTCGACCCTCGATCACC
TGACGAAAGGCCGCATCGGCTGGAACATCGTGACGGGCTATCTCGACAGCGCCGCGCGCGGCATGGGGCTCGCGCGGCAG
ATCGGGCACGACGACCGCTACGCGCGCGCCGACGACTACATGGAAGTGGTCTACCAGCTCTGGGAGCGGAGCTGGGACGA
CGACGCCGTGATCCGCGACCGCGCTGCGCGCGTGTTCGCGCGGCCCGACAAGGTGCGCCGCGTGCGCCACGACGGACCGT
ATTACTCGGTCGACGCGATTCATCTGAGCGAGCCTTCGCCGCAGCGCACGCCGGTGCTGTATCAGGCCGGAGCGTCGGCG
CGCGGCGTCGAGTTCGCCGCGAAGCACGCCGAATGCGTGTTCGTGAACGGCCAGAGCAAGGCCGCCGCGCGCTCGGCGGT
GGCCGATATTCGCGCGGCCGCCGCGCGGATCGGCCGCGATCCGGCGTCGATCAAGGTCTTCGCGGGCATCACGGTCGTGA
CGGACGAGAACGAGCGGGCCGCGCGCGAGAAGTTCGACGAATACCGGCGCCACGCGAATCCGGAGGCGGGCCTCGCGCAC
TTCGCGAGCTCGACCGGCATCGATTTCTCGCGCTTCGGCCTCGACGAGCCGATCGCGCACGTGAAGACCGATTCGATTCA
GTCGGCCGTCGACGCGATCTCGAAGAAGAGCGCGTCCGGCGCATGGACCGTGCGGCGCATGCTCGAGCAGATGTCGATCG
GCGGCCGCTATCAGCCGGTGGTCGGCTCGCCGTCGCAAGTGGCGGACGAGCTTGCCGCATGGGTCGACGAAACGGATGTC
GACGGCTTCAACGTGACGCGCACGGTCGTGCCCGAGTCGTTCGACGATTTCGTCGACCGGGTGGTGCCCGCGTTGCAGGA
TCGCGGCCTCTACAAGGAGGACTACGATCGCGCGCCGACGCTGCGCGCGAAGCTGTTCGGCGCGGGCGGGCGGCTGCCTG
ACTGGCATGCGGGCGCGCGGCACCGGTTCGGCTGCGCGCGCGAAACCGCGCGGACATGA

Upstream 100 bases:

>100_bases
CGAACGATCCGCGCATTCGCCGGTTCATCGCGATCTATCAGCATTCGCCGGCGGTCCGGCAGGCGCTGGACGACGCATTC
GGCCGGCTGTACGCGATCGC

Downstream 100 bases:

>100_bases
TTGAGCGACGAGGCGATCCGATGGCGCAGCTACTCGATTCACCCGGTTTCATCGAACGCTCGGCCGCCGTGCCGCACAAG
GCCGCGGCCGCGCCGGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MVKPQARAMTNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKFDAIFLADIVGVYDVYGGGPD
LALRESVQVPVNDPLLLVPAMAQVTKHLGFGVTANLTYEPPYLFARRMSTLDHLTKGRIGWNIVTGYLDSAARGMGLARQ
IGHDDRYARADDYMEVVYQLWERSWDDDAVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASA
RGVEFAAKHAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERAAREKFDEYRRHANPEAGLAH
FASSTGIDFSRFGLDEPIAHVKTDSIQSAVDAISKKSASGAWTVRRMLEQMSIGGRYQPVVGSPSQVADELAAWVDETDV
DGFNVTRTVVPESFDDFVDRVVPALQDRGLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGCARETART

Sequences:

>Translated_472_residues
MVKPQARAMTNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKFDAIFLADIVGVYDVYGGGPD
LALRESVQVPVNDPLLLVPAMAQVTKHLGFGVTANLTYEPPYLFARRMSTLDHLTKGRIGWNIVTGYLDSAARGMGLARQ
IGHDDRYARADDYMEVVYQLWERSWDDDAVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASA
RGVEFAAKHAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERAAREKFDEYRRHANPEAGLAH
FASSTGIDFSRFGLDEPIAHVKTDSIQSAVDAISKKSASGAWTVRRMLEQMSIGGRYQPVVGSPSQVADELAAWVDETDV
DGFNVTRTVVPESFDDFVDRVVPALQDRGLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGCARETART
>Mature_472_residues
MVKPQARAMTNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKFDAIFLADIVGVYDVYGGGPD
LALRESVQVPVNDPLLLVPAMAQVTKHLGFGVTANLTYEPPYLFARRMSTLDHLTKGRIGWNIVTGYLDSAARGMGLARQ
IGHDDRYARADDYMEVVYQLWERSWDDDAVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASA
RGVEFAAKHAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERAAREKFDEYRRHANPEAGLAH
FASSTGIDFSRFGLDEPIAHVKTDSIQSAVDAISKKSASGAWTVRRMLEQMSIGGRYQPVVGSPSQVADELAAWVDETDV
DGFNVTRTVVPESFDDFVDRVVPALQDRGLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGCARETART

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=284, Percent_Identity=26.4084507042254, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 52365; Mature: 52365

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPQARAMTNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKF
CCCCHHHHHCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
DAIFLADIVGVYDVYGGGPDLALRESVQVPVNDPLLLVPAMAQVTKHLGFGVTANLTYEP
CEEHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEECC
PYLFARRMSTLDHLTKGRIGWNIVTGYLDSAARGMGLARQIGHDDRYARADDYMEVVYQL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHH
WERSWDDDAVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASA
HHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEECCCCC
RGVEFAAKHAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERA
CCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHH
AREKFDEYRRHANPEAGLAHFASSTGIDFSRFGLDEPIAHVKTDSIQSAVDAISKKSASG
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
AWTVRRMLEQMSIGGRYQPVVGSPSQVADELAAWVDETDVDGFNVTRTVVPESFDDFVDR
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHCCCCHHHHHHH
VVPALQDRGLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGCARETART
HHHHHHHCCCCHHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MVKPQARAMTNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKF
CCCCHHHHHCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
DAIFLADIVGVYDVYGGGPDLALRESVQVPVNDPLLLVPAMAQVTKHLGFGVTANLTYEP
CEEHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEECC
PYLFARRMSTLDHLTKGRIGWNIVTGYLDSAARGMGLARQIGHDDRYARADDYMEVVYQL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHH
WERSWDDDAVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASA
HHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEECCCCC
RGVEFAAKHAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERA
CCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHH
AREKFDEYRRHANPEAGLAHFASSTGIDFSRFGLDEPIAHVKTDSIQSAVDAISKKSASG
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
AWTVRRMLEQMSIGGRYQPVVGSPSQVADELAAWVDETDVDGFNVTRTVVPESFDDFVDR
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHCCCCHHHHHHH
VVPALQDRGLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGCARETART
HHHHHHHCCCCHHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]